Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03905 ATGCATAATCTCTATGTCTCACCTTCTTCTTCAACCTTACACCTTTCAAACCACATAACCAAACCAAAGTTTCACCCTTTTCAAAATTCTCATTCTCACAATTTTTCTTCTTCACCACTTAGACTCACCATTGAGGGATTTTCATGCCCATCTTCTTCTTTCTTCCAAACTGTTAGAAAATCTTCATCTTTTCGCATTTCAAATCCAAAAATGGATTCTTTTAGAGTCTTTGCTGCTTCTTCTGTCCCTGAGGCACAGAGTGATGAAGGGAAACAAACTTCTGGCCTTGTTCAGTCTCTTCAGCTTGGTTTCATGTTTGCTACTTGGTATCTCTTGAATATTTACTTCAACATTTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACAACATTCCAATTCGGCTTTGCTTCATTGGTGATCAATTTGATCTGGACTTTGAATCTTCATCCCAGACCAAAAATTAGTAGATCACAGCTTATGACAATCCTTCCACTTGCCGTGGCTCATACATTGGGGAACCTTTTGACGAACATTAGTCTTGGCAAGGTTGCTGTTTCTTTCACTCACACCATCAAATCCATGGAACCTTTCTTCACTGTTGTTCTTTCATCCCTTCTTTTGGGTGAGATGCCTACTTTATGGGTGGTTTCTTCTCTTCTACCTATAGTTGGGGGAGTGGCATTGGCATCAATGACTGAAGTCTCTTTCAATTGGATTGGATTCAGCACTGCAATGGCATCCAACCTTACGAATCAATCACGGAATGTTTTGAGCAAAAAACTAATGGCTAACGAAGAGGAAGCTTTGGACAATATCAATCTCTACTCAGCTATAACCATCATTTCGTTTTTTCTGTTGGTACCGTATGCTATTTTTTCGGAGGGTGTCAAGTTTACTCCTTCGTACCTGCAATCTGCCGCAAGCCAAGGATTGAATGTTCGAGAGCTATGTATAAGATCCGTTTTGGCTGCCTTCTGCTTCCATGCATACCAGCAGGTTTCATATGGGATATTAGAGAAAGTGTCGCCTGTGACACACTCAGTCGGAAATTGTGTTAAGCGTGTCGTTGTCATCGTCTCTTCTGTTATCTTCTTCCAAACTCCCGTCTCACCTATCAATGCTCTTGGAACTGCTATTGCACTTGTTGGAGTTTTCTTGTATTCAAGGGCAAAGAGGATTAAGCCAACGCCGAAAACAAAGGAAGCATAA 1224 0.4069 MHNLYVSPSSSTLHLSNHITKPKFHPFQNSHSHNFSSSPLRLTIEGFSCPSSSFFQTVRKSSSFRISNPKMDSFRVFAASSVPEAQSDEGKQTSGLVQSLQLGFMFATWYLLNIYFNIYNKQVLKVYPFPATVTTFQFGFASLVINLIWTLNLHPRPKISRSQLMTILPLAVAHTLGNLLTNISLGKVAVSFTHTIKSMEPFFTVVLSSLLLGEMPTLWVVSSLLPIVGGVALASMTEVSFNWIGFSTAMASNLTNQSRNVLSKKLMANEEEALDNINLYSAITIISFFLLVPYAIFSEGVKFTPSYLQSAASQGLNVRELCIRSVLAAFCFHAYQQVSYGILEKVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINALGTAIALVGVFLYSRAKRIKPTPKTKEA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03905 407 PANTHER SOLUTE CARRIER FAMILY 35 101 399 - -
Mepo5g03905 407 Pfam Triose-phosphate Transporter family 100 393 IPR004853 -
Mepo5g03905 407 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 100 403 IPR004696 GO:0016020|GO:0022857|GO:0055085
Mepo5g03905 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 318 397 - -
Mepo5g03905 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03905 Mepo-Chr5 48915113 48919782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03905 2 404 Antiporters AT5G33320 59.406 1.93e-152 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03905 K15283 - gmx:100819280 578.556