Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03839 ATGATCATGGCGGAACTAACCGATTCCACCGCCGCCGGTAACAACCTTCCGCCGCCGCAACAACCACCACAACAAATTGACACGCGTTCAATCCTCTGCATCGACCTCAACGAGATCCCTTCACCTTCACCTTCTTCTTCCTTCGTTGAAACCCTACCTGACTTCACCGTCGACATCGTTCGTACTTATCACGAGAATCCCGCTCCTCCTCCCGGTGGTCCTGCGCCTCTTCCCGGCGGTGTTACTTCCTGCGCTGTTTGTGCTAAGTCCGGCGTCGGCGGTTTGGTGTGTGATGGATGTGAACGGAGTTTTCATTTGGCGTGTGCTGGAGTTCGTGGTGGAAGAATTGGAGCGGCGAGTATAGGAGAGTGGGTGTGTGGTGAGTGTTTAGCGGGGGGTGTGAAAAGTAAAAGATGGCCGTTGGGTGTGAAGAGTAAACAGTTGCTTGATATTAATGCTTCTCCGCCTAGTGATGTTGATGGAGAGGAGTTGCATGAATCGAGAAAGCACGCTATGGGTGATAAATCTTTTGCTGCCAATCATTTTGGTGCTTCAGTGACGTATTCAACCTTCAATAACGGGAGTGTGGTTGGCTTCCAAAGGGCATCTGGAGCTGTGACTCGTCCTGTTAGAGTGGGTTTTGAGGATATATTGAATCACACCCAATCAATGGCTAGAAGCTTTGAGGAAGTACCATCTCAGACTCAAGGTCCAAATGAGTTAATTTTGCAGGCTCTTAGAGATTTTATATCTGAAAGGCATGGTGTACTGGTGGAAGGTTGGCGAGTAGATCTTAGACCATCAATGATCGGCTCTGACATGTATGCAGTTTACTGTGCACCTGATGGAAAGATATTCGATTCTGTGTATGAAGTAGCTAATTATCTGGGGCTACCGTCTGGCTACAATTCTATGGAATCTGAAGTAAGAAATGAAACGTCTCTTTCTTCTGGTGGGCCTCACCTATCCAGAAAAAGGAAGTCTTCTAGAACTCTGGCAGCCAATGGTTTTGCGGAAAAGCAGGGAACCTTTGTAAATTATAAGGATTGTTCTTCTGATGGTTTAAGCATGGAACATGTGATTGCTCAGGGAACCGCCCTAAAAGCCACTGAGATTAGAAGAAAAGAGAATGGTCACTCCGACCCTCATCAATTTGCTGACGAACTTCCTCTGCAGTTTAAGGACTTCTCTGTTCTTTCTTTGGGAAAAGTTGATGGGAGACCTTCATATTATGATGTTAACCTTATCTTTCCTGTGGGTTATAAATCTTGTTGGCATGATAAGATTACTGGCTCTCTTTTTACGTGCGAAGTTTTGGACGGGGGTGATTCTGGACCTATATTTAGGATTAAAAGGTGTTCATGTTCGGAATTTCCTATTCCAGATGGGTCAACCATCCTTTCAATTCACAATCATTGTCAATTTGTGAGCGAAACCAATGAAGGTCAGAGAGAGACTAATGATAGTATGGATTTAGACGGTGATGAGAGTATCCAGATGATGCTTTTAGAACCTTGTGCACCAACAGAAGATGACATCTTAAGTTGTGTTGTCAGTTGCTCAAGTGAAGCATATGCATCAGAAGGATTAAGGCCAGTTGCTGGTTCAATTCAATATAATACTGGATACTCATTTTCTGATAATATGAATTTTTGTGATGAAATTGGTCAAATTTTGGTGGAAGAGCGGTCCCCATTCTCAGCATGGAGAGTTATTTCTCAAAAGTTGGTTTGGGATCTTTTAGAAAGATTCAATGAAATTCTAGACCTGAAAGAACCATTGTTCTTAGAAGAGCTCGAGAAGGAACTTATCAACCCATGGTTCAATGAGTTAGATTTCCCTGAGAAATCTGACAGGGGAATGGGTGGAAGTTCACGAGGGGGTGATGGTGATTGCCGATTAATATCTGAAGCATGTCCATCAGGTTCCACAGGAGCTTCTTCCTATGTCAGATGCTTTGGTGCGTCTTTGACTAAGTCTCACAGTTCACTACTAAGAGTGCTAATAGGTGAACTGCAATCGAAAGTGGCTGCTCTGGTGGATCCAAATTCTGAGCCTGGAGAGGCTCGGACAAGACGGGGAAGAAGGAAAGATATGGATAGTGCAGTTCCACGGACCAAGATCAATATGCTTCCTATAAATGAATTGACCTGGCCAGAACTAGCGCGTAGATATATCTTGGCTTTCTTGTCAATGGACGGTAACCTGGAGTCTGCGGAGATTACTGCCCGGGAAAGTGGTAAAGTATTTCGTTGCTTAAGAGGTGATGGTGGTTTGCTGTGTGGTTCCCTTCCTGGTGTGGTTGGGATGGAAGCTGATGCATTGTTGCTTGCGGAGGCTACGAAGAAGATTTTTGGTTCTTTGAGCAGAGAAAAAGATGTACTCATCCTAGAAGAAGAGGAGTCTGATGAAAATGGTTCTTCTGAAGCTCAATTGGCGAATGATGGTAATATTCCTGAATGGGCACAAGTGCTGGAACCTGTCAGAAAACTACCAACAAATGTGGGAACCCGAATCAGAAGGTGTGTTCATGCAGCTCTAGAAAAGAATCCGCCCGATTGGGCAAGGGAAATACTGGAGCACTCGGTTAGCAAGGCAGTGTACAAGGGCAATGCATCTGGACCAACAAAGAAAGCAGTTGTTGCATTATTGGATGGTGTAACTGATGGAGTGCAGCAGAATCCCAACAAGGGAAGGAAAAAGAAATTTTTTATATCTATTTCTGACATTATCATGAAACAATGCCGCATTGTATTACGTCGCGCAGCTGCTTTAGATGATTCGAAAGTTTTTTGCAATTTGCTGGGAAGAAAATTAACAAATTCTTCTGACAATGATGATGAGGGGCTTCTTGGAACTCCAGCTATGGTGGCCCGCCCTCTTGACTTCCGGACTATTGATCTAAGATTGGCTTCTGGAGCTTATGGTGGATCACATGAAGCTTTTCTCGAGGACGTACGTGAGCTGTGGAGCAATGTTCGTGTTGCTTTTGGGGATCAACCTGATTTAGTTGAACTGTCAGAAAAATTATCCCAGAATTTTGAAAGTTTATACAATGAGGAGGTTGTCACCTACGTGCAAAAGTTTACAGACTATGCTGAAGTGGGATGCATAAATGCTGAAATGAAAAAAGAAGTTCAGGCTTTTATTGCTGCATCAAATGAGATTCCGAAAGCCCCTTGGGATGAGGGAGTCTGTAAAATTTGTGGCATCGATAGGGATGATGACAGTGTCTTACTGTGTGATACTTGTGACGCTGAGTATCATAAATATTGCTTGAACCCTCCTCTTGCAAGGATCCCTGAAGGAAACTGGTACTGTCCATCTTGTATTGGTGGTAAACATGCAACTCAAGATCTCACAGAACGAGCACAGCTTACTGGAAAACGTAGAAGTAAAAAATTCCAGGGACAAGTTAATTGTCTTTACTTGGATGCGTTGACTCATTTATCATCTGTAATTGAAGAAAAAGAATATTGGGAGTACAGTGTGGGAGAGAGAGCGCTCCTTCTCAAGTTTTTATGTGACGAGTTGCTCAATTCTTCCCTGATACGACAGCAGCTTGAGCAATGTTCAGAGTTGTCTGCTGAATTAAATCAGAAGTTGCGTGGACTTTCTGTAGAGTGGAAAAACCTGAAAATTAAGGAAGACGTTTTATCCACAAAAGCTGCCAAATTTGGTACATTGTCACAATGTACCACTGGGGAAGTTGGTCTTAAGGAAGGGTTCACATCTTTGTTCTCAAATACTAGTAAATGTCTGGTTAAGCCACATGCTACAACCACCAATCCTAGTGGTCTTGGGGTATTTGATGATAGTCTACCTTCAGAAGAGATTCCCAAAGAGAAGTGCAGGTTCAATAGTGTTGATAAAATAATATCTGTGACACATTCAAATTCTGATAGCCAAAATATGAATTCCATAGAAGGACAGCTTAAGACTGTTCCTGTGGCTGTGGAGTTTCAATGTACAGATAAATCCCCCAAGTCTTTTCCATCCTCAAATCATATGCCTCAAGAAATAAATGGTTACAGTGAAGGACAATGTGTGCCTGTTGAAGTTTCCCAAAATGCTGTTAATGAGTCGGAACCATACCACCTTGAGCTCAATGCCGTCAAGCGTAATATCTCACTACTGCAGGAATCTATAAATAGCGTAGGATCACAGCTTCTGAAGCTCCCTGTTCGTCGGGAACTTTTGGGTATTGATTCCATTGGCCGACTGTACTGGGCTTTGGCTACACCCAGAGGACGATCACGTATAGTTGTTGATGCAAGCGCTGTTGTTCAGCATGGAAGAGGATTGTCAGTTAGCAAAGATTCTGGAGAGAAGCTTTCTGCTCTGCAGCATTGTAAATCATCTGAGAAGGATAACTATAAGATGTTAGGGCTGATGAAGGACTGCTCTCCTTTGATGTCCCAACCACTTAATGCGTTAGCCAATAGTTCACCATGGATTGTTTATGAAACTGATTCAGAAATCGAGGAGCTATTGGGTTGGTTAGATGATTATGACCCTAAAGAAAAAGAACTGAGAGATTCCATTATGCTGGGGCCAAAATATAGATCTCAAGAGTTTATTAATGCACACACTGAAGGTCAGGTTGAGGACCAAGGACCTGTTTATTTGCCAAGAAATACAGCACCTAACTCTCTTGTTACAAAGGCCACTTCTTTGCTGGAAAAGAATTACGGTCCCTTCTTTGAGTTGGATACTGCTGAGGTTTTGAAGAATCAAAATAAAAAGGCCAGAACAACTAATGATGAAAAGTTGTATAGGTGTGAGTGCCTAGAACCCATATGGCCTTCTAGGAAACATTGCTTGTATTGCCACAAAACCTTTTTGAGCGATGTGGAGTTTGAGGGACACAACGGTGGAAAATGTAAAGCAGGACTTCTGGCGTTGGGGAGGAATAAAGATAAAAATGGATCTTCTAAAGGAAGGAAGAACTTGAAATGTGATACCTCACATGAAAAATCCAGAGCTGACACAGAAACAGCTGGAACCTCAATCAATAGATGTTCTTCTGTAAATTCGAGATTGACTAAGTTTTCAAATGAAAACCCCTCTTGCCCATTTAACTTCGAAGATACATGCTCAAAGTTTGTGACAAATGATTCCAACAAGGAACTTGTCAGAGAAATTGGTCTTATTGGTTCAGATGGTGCCCCATCCTTTGTGCCTTCCGTATCTCCTTTTGTTAGTGATTATACACGACCTTTAACCACAAAGGATGTTGGCGTTGCTGGTGGTGCGTCGAAAGCTTCACAAAGCCAGGTTTCTCAGGAAAACACTGACGGAGCTGGCATATGCCATGACCACAAGTCAGGCAAATCTACGGAAAGTTTAGCTGCAAATAGAAGCAACAAAGCAGGAAATTCCAACAAATCATCTTTGGGAGAACAAAGAGACGGGAAACTATCTATTTGTAATCCTGCTTCAGATAAGGGAGTTGATGGTTGCTGTGTGGTTCCTTTGTCCTCCTCGAGACCATTAGTTGGAAAAGTTTCTCATATTTTGAAGCAACTAAAGATTAATCTACTTGATATGGATGCTGCACTTCCGAAAGCTGCTCTAAGACCATCAAAGGCACAGTTGGACAGAAGACAGGCCTGGCGTGCATTTGTTAAATCTGCAACGACTATATATGAGATGATCCAGGCAATAATTACACTGGAGGATATGATTAAGACGGAGTTCTTAAAGAATGACTGGTGGTACTGGTCATCATTCTCAGCTGCTGCCAAATCTTCTACTTTGCCTTCTCTTGCTCTTCGCATATACTCCCTTGATTCAGCCATTATGTATGAGAAAATGCCTAATTCAAGTTTAACTGAGAGCTCTGATCCTCCTGCCGTAGCGGAACCGAAGCCAGTGATCACGGTGGATGCAGATAAATCCAAAGGAAGCCGGAAGTCAAACAGGAAAAGGAAGGAATTGGATGGTTAA 5949 0.4293 MIMAELTDSTAAGNNLPPPQQPPQQIDTRSILCIDLNEIPSPSPSSSFVETLPDFTVDIVRTYHENPAPPPGGPAPLPGGVTSCAVCAKSGVGGLVCDGCERSFHLACAGVRGGRIGAASIGEWVCGECLAGGVKSKRWPLGVKSKQLLDINASPPSDVDGEELHESRKHAMGDKSFAANHFGASVTYSTFNNGSVVGFQRASGAVTRPVRVGFEDILNHTQSMARSFEEVPSQTQGPNELILQALRDFISERHGVLVEGWRVDLRPSMIGSDMYAVYCAPDGKIFDSVYEVANYLGLPSGYNSMESEVRNETSLSSGGPHLSRKRKSSRTLAANGFAEKQGTFVNYKDCSSDGLSMEHVIAQGTALKATEIRRKENGHSDPHQFADELPLQFKDFSVLSLGKVDGRPSYYDVNLIFPVGYKSCWHDKITGSLFTCEVLDGGDSGPIFRIKRCSCSEFPIPDGSTILSIHNHCQFVSETNEGQRETNDSMDLDGDESIQMMLLEPCAPTEDDILSCVVSCSSEAYASEGLRPVAGSIQYNTGYSFSDNMNFCDEIGQILVEERSPFSAWRVISQKLVWDLLERFNEILDLKEPLFLEELEKELINPWFNELDFPEKSDRGMGGSSRGGDGDCRLISEACPSGSTGASSYVRCFGASLTKSHSSLLRVLIGELQSKVAALVDPNSEPGEARTRRGRRKDMDSAVPRTKINMLPINELTWPELARRYILAFLSMDGNLESAEITARESGKVFRCLRGDGGLLCGSLPGVVGMEADALLLAEATKKIFGSLSREKDVLILEEEESDENGSSEAQLANDGNIPEWAQVLEPVRKLPTNVGTRIRRCVHAALEKNPPDWAREILEHSVSKAVYKGNASGPTKKAVVALLDGVTDGVQQNPNKGRKKKFFISISDIIMKQCRIVLRRAAALDDSKVFCNLLGRKLTNSSDNDDEGLLGTPAMVARPLDFRTIDLRLASGAYGGSHEAFLEDVRELWSNVRVAFGDQPDLVELSEKLSQNFESLYNEEVVTYVQKFTDYAEVGCINAEMKKEVQAFIAASNEIPKAPWDEGVCKICGIDRDDDSVLLCDTCDAEYHKYCLNPPLARIPEGNWYCPSCIGGKHATQDLTERAQLTGKRRSKKFQGQVNCLYLDALTHLSSVIEEKEYWEYSVGERALLLKFLCDELLNSSLIRQQLEQCSELSAELNQKLRGLSVEWKNLKIKEDVLSTKAAKFGTLSQCTTGEVGLKEGFTSLFSNTSKCLVKPHATTTNPSGLGVFDDSLPSEEIPKEKCRFNSVDKIISVTHSNSDSQNMNSIEGQLKTVPVAVEFQCTDKSPKSFPSSNHMPQEINGYSEGQCVPVEVSQNAVNESEPYHLELNAVKRNISLLQESINSVGSQLLKLPVRRELLGIDSIGRLYWALATPRGRSRIVVDASAVVQHGRGLSVSKDSGEKLSALQHCKSSEKDNYKMLGLMKDCSPLMSQPLNALANSSPWIVYETDSEIEELLGWLDDYDPKEKELRDSIMLGPKYRSQEFINAHTEGQVEDQGPVYLPRNTAPNSLVTKATSLLEKNYGPFFELDTAEVLKNQNKKARTTNDEKLYRCECLEPIWPSRKHCLYCHKTFLSDVEFEGHNGGKCKAGLLALGRNKDKNGSSKGRKNLKCDTSHEKSRADTETAGTSINRCSSVNSRLTKFSNENPSCPFNFEDTCSKFVTNDSNKELVREIGLIGSDGAPSFVPSVSPFVSDYTRPLTTKDVGVAGGASKASQSQVSQENTDGAGICHDHKSGKSTESLAANRSNKAGNSNKSSLGEQRDGKLSICNPASDKGVDGCCVVPLSSSRPLVGKVSHILKQLKINLLDMDAALPKAALRPSKAQLDRRQAWRAFVKSATTIYEMIQAIITLEDMIKTEFLKNDWWYWSSFSAAAKSSTLPSLALRIYSLDSAIMYEKMPNSSLTESSDPPAVAEPKPVITVDADKSKGSRKSNRKRKELDG 1982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03839 1982 ProSitePatterns Zinc finger PHD-type signature. 1066 1110 IPR019786 -
Mepo5g03839 1982 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1051 1136 IPR013083 -
Mepo5g03839 1982 MobiDBLite consensus disorder prediction 1641 1664 - -
Mepo5g03839 1982 ProSiteProfiles Zinc finger PHD-type profile. 1063 1113 IPR019787 -
Mepo5g03839 1982 Pfam PHD-finger 1065 1111 IPR019787 -
Mepo5g03839 1982 SUPERFAMILY FYVE/PHD zinc finger 69 130 IPR011011 -
Mepo5g03839 1982 SUPERFAMILY Bromodomain 900 1020 IPR036427 GO:0005515
Mepo5g03839 1982 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1147 1189 IPR028942 -
Mepo5g03839 1982 MobiDBLite consensus disorder prediction 1941 1982 - -
Mepo5g03839 1982 MobiDBLite consensus disorder prediction 309 330 - -
Mepo5g03839 1982 MobiDBLite consensus disorder prediction 1752 1766 - -
Mepo5g03839 1982 SMART PHD_3 83 130 IPR001965 -
Mepo5g03839 1982 SMART PHD_3 1065 1111 IPR001965 -
Mepo5g03839 1982 Coils Coil 1188 1208 - -
Mepo5g03839 1982 MobiDBLite consensus disorder prediction 1748 1804 - -
Mepo5g03839 1982 Pfam Methyl-CpG binding domain 248 299 IPR001739 GO:0003677
Mepo5g03839 1982 ProSiteProfiles Zinc finger PHD-type profile. 81 132 IPR019787 -
Mepo5g03839 1982 MobiDBLite consensus disorder prediction 681 700 - -
Mepo5g03839 1982 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 135 IPR013083 -
Mepo5g03839 1982 PANTHER OS02G0192300 PROTEIN 24 577 - -
Mepo5g03839 1982 MobiDBLite consensus disorder prediction 1639 1668 - -
Mepo5g03839 1982 Gene3D - 908 1029 IPR036427 GO:0005515
Mepo5g03839 1982 ProSiteProfiles Bromodomain profile. 956 1004 IPR001487 GO:0005515
Mepo5g03839 1982 MobiDBLite consensus disorder prediction 686 700 - -
Mepo5g03839 1982 ProSitePatterns Zinc finger PHD-type signature. 84 129 IPR019786 -
Mepo5g03839 1982 ProSiteProfiles FYR domain FYRN motif profile. 388 441 IPR003888 GO:0005634
Mepo5g03839 1982 Gene3D - 389 498 - -
Mepo5g03839 1982 CDD PHD1_Lid2p_like 1065 1110 - -
Mepo5g03839 1982 MobiDBLite consensus disorder prediction 1 25 - -
Mepo5g03839 1982 MobiDBLite consensus disorder prediction 1781 1804 - -
Mepo5g03839 1982 MobiDBLite consensus disorder prediction 1961 1982 - -
Mepo5g03839 1982 Pfam Bromodomain 954 1008 IPR001487 GO:0005515
Mepo5g03839 1982 SUPERFAMILY FYVE/PHD zinc finger 1053 1115 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03839 Mepo-Chr5 47870490 47885165 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03839 27 577 C2H2 Transcription Factor Family AT3G01460 41.146 5.93e-109 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mepo5g03839 Bromodomain 4.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03839 K22768 - gmx:100791814 2020.74