Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo5g03834 | ATGGCATCTATTATAGCTCTAGTACTAACATTTGTGGCGCTAGTGTTTTTTGTCATATGTCGTATGTGTCTTCCTCTTGCGATTTATAGGATTTGGAGAGTAGGAATAGAAACAATAATGGTTGATAGGGGAAGAAGAAGCCTTTCCAAAGTTGATTTAGAGAAGCTTCCATGTTATGATTATGTTGCAAAAGAAAATGGAAGTAACCCTTTAGATTGTGCAATTTGTTTGGAGAATTTCACTATTGGGGATAAGTGTAGATTGTTACCTACTTGCAAGCACAATTTTCATGCTCAATGTGTGGATCAATGGCTTTTGAGGAATTCCATTTGTCCAATTTGTAGATCTATGGTTGGTTCTCATAGTGGAGACAAAGTTGTTATATGTAACAATGGAAGAGAAAGCATAGAAAATGGATCATCTAGAAATGTTGTTATAGAATTAAGAGAAAATATTCCAACATTAGAAGTAGAATCACAAGAGCACTAA | 489 | 0.3456 | MASIIALVLTFVALVFFVICRMCLPLAIYRIWRVGIETIMVDRGRRSLSKVDLEKLPCYDYVAKENGSNPLDCAICLENFTIGDKCRLLPTCKHNFHAQCVDQWLLRNSICPICRSMVGSHSGDKVVICNNGRESIENGSSRNVVIELRENIPTLEVESQEH | 162 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo5g03834 | 162 | Pfam | Ring finger domain | 72 | 115 | IPR001841 | - | |
Mepo5g03834 | 162 | CDD | RING-H2_EL5-like | 72 | 115 | - | - | |
Mepo5g03834 | 162 | ProSiteProfiles | Zinc finger RING-type profile. | 73 | 115 | IPR001841 | - | |
Mepo5g03834 | 162 | SMART | ring_2 | 73 | 114 | IPR001841 | - | |
Mepo5g03834 | 162 | SUPERFAMILY | RING/U-box | 64 | 120 | - | - | |
Mepo5g03834 | 162 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE | 4 | 149 | - | - | |
Mepo5g03834 | 162 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 48 | 125 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo5g03834 | Mepo-Chr5 | 47825280 | 47825768 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo5g03834 | 5 | 130 | C3H Transcription Factor Family | AT4G28890 | 35.556 | 1.45e-17 | 76.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo5g03834 | - | K15692 | mtr:25495193 | 279.256 |