Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03831 ATGTTTAAGTCTCTTGGTGGTCCAATCTATTTCGTTGTTGCTCTTGGTGCTCTCTCGGACTCCTCAAAAAGTGATATTAGAGCCTTTGTTCGGCTGGATGAGGGAGCGGGAGTAAATCAAGATATGATGGGTCCTTGTATCGAAAGTATATTGATTTTGATTGGAGCAGCAACAATAGGGGTTACTTTGATATCATTTTTCACTACATACATCATTTATCTCAGGTTCTTCAGATCAGCCTCACTACAAAATAAAGTGACATTTGGAAATTTATTAAAGAAAATTTCTTGTCCAAAAATTCCTATCAAGGAAGTGTATGCTGCCACCAACAATCTCAATGAAATGAATATCATTGGGAAAGGAACTTCAGGTAAGGTCTATAAAGGTACAATGAAAAATAATCAGCAAGTTGCAGTGAAGCACATTATCAATGATGATGGAAATATAGAATCTTTTGTTAGAGAAGTTACAAGTTTATCTCATGTCAAGCACCCAAATCTTGTTTCTTTGCTTGGCTGTTGTGTTGATGGAGATGAATGTCTTCTTATCTATGAACTATGTCCAAATGGAAGTCTTTCAGAATGGCTATTTGGCAAGAACAAGGTGCTTTCATGGATAAAGAGGCTTGAAATTGCAATTGACAGTGCTAGAGGTGTTTGGTTTTTACACACATATCAAGGAGGCTGCATTGTTCACCGTGATATCAAGCCGACAAATATCCTTCTTGGGTCAAATTTTGAGGCAAAACTATCAGATTTTGGATTATCTAAAGTTATTGAGATAGGTGAAACATATGCTAGTTCAGAAGTGAGAGGAACTTTTGGATATGTGGATCCTGAATACCAAAGCAACCACCATGTAAATTCATCTGGTGATGTTTACAGTTTTGGCATGGTACTTCTACAAATTCTATCCGGAAAGAGGGTCATAAATTTGAAACTGAAAAGACCAATGTCACTTAGTAAAATGGCAAAAACATTCACTAGGAATGGTAGCATTACAGAATTTGCTGATCCTAGACTTGAAGGAAATTATTCTGAAGAAGCATTTGATTTTACACTTCAATTGGCTCTATCATGCACATCCCTTGACCAACAAAGACCATCCATGGAACAAGTTATCCAAACACTAGAAGAGGCCTTATTGATTTCAAAGGGAAGGAAGATTTTTACTAAAGAAACTCTAGAAGATCTTAGTATTTCAACTGGTCCATGA 1215 0.3654 MFKSLGGPIYFVVALGALSDSSKSDIRAFVRLDEGAGVNQDMMGPCIESILILIGAATIGVTLISFFTTYIIYLRFFRSASLQNKVTFGNLLKKISCPKIPIKEVYAATNNLNEMNIIGKGTSGKVYKGTMKNNQQVAVKHIINDDGNIESFVREVTSLSHVKHPNLVSLLGCCVDGDECLLIYELCPNGSLSEWLFGKNKVLSWIKRLEIAIDSARGVWFLHTYQGGCIVHRDIKPTNILLGSNFEAKLSDFGLSKVIEIGETYASSEVRGTFGYVDPEYQSNHHVNSSGDVYSFGMVLLQILSGKRVINLKLKRPMSLSKMAKTFTRNGSITEFADPRLEGNYSEEAFDFTLQLALSCTSLDQQRPSMEQVIQTLEEALLISKGRKIFTKETLEDLSISTGP 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03831 404 FunFam probable receptor-like protein kinase At5g59700 187 395 - -
Mepo5g03831 404 Gene3D Transferase(Phosphotransferase) domain 1 187 394 - -
Mepo5g03831 404 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 48 379 - -
Mepo5g03831 404 ProSiteProfiles Protein kinase domain profile. 112 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03831 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Mepo5g03831 404 Pfam Protein kinase domain 114 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03831 404 SUPERFAMILY Protein kinase-like (PK-like) 95 378 IPR011009 -
Mepo5g03831 404 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
Mepo5g03831 404 SMART serkin_6 112 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03831 404 Gene3D Phosphorylase Kinase; domain 1 76 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03831 Mepo-Chr5 47804109 47807589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03831 61 400 Receptor kinase-like Gene Family AT1G53420 36.103 1.08e-61 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Mepo5g03831 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03831 - - mtr:25495195 676.396