LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g03818	ATGACAAGAAGATGGTCCTTTTACATGGATTTTCTGCCAATTGTAGTGATCATAGGCCAGGAAACTATTGAAATGGCTTTACTTACTTTGTTCAAAGCAGCCACACTTCAAGGGATGAACAACCATGTCTTTATTGCCTATGCTTATGGCATTGGTACTACTATTCTCCTTCCTATCACTTTTTTTAGAAGAAGATTGGTTCCACCACTAAGTTTCTCCATAATACTGAAAAGTGTGCTTCTTGGAGCAATAGGATGTTCAGCTCAGATTTTGGGGTATATTGGTATAAATTACAGTTCTCCAACACTTGCTTCAGCAATTGGTAATCTGGTACCTGCTTTTACTTTCATTCTAGCTGTCATTTTCAGGATGGAAAATTTAGCTGCAACTAGAAGTAGTAATGCTAAAGTAATAGGAAGCATAATATCAATAGCAGGTGCTTTTGTAATGACTTTCTACAAAGGACCATCCATCATGAATTCCTCATCACCTCATCAACCAATTGGCTTTCTCATGTCAGTGGATTCAAGTTGGGCCATTGGTGGCATTCTGCTAACAATTGACTTCTTTCTGCTATCGCTACGCTACATTTTTCAGGTACATATCTTGAAAGAGTTCCCAGATGAAGTAACTTTAGTCTTGTTATACACCATTACTGCTACCATCATATCAACAGTTGTAGCATTGTTATCAGTTCCTAATGCAAGTGCTTGGAAAATAGGCCTAAATCTCTCACTCATCTCCATTGTTTCTTCTGGCATATTTGGGAAATTTATCAGCAGTACAGCTATTGCATGGTCATTGAACATGAAGGGAGCTGTCTATGTAACCTCATTCAAGCCTCTACAAATTGTTATTTCTGTTGGCTTAGGAGTTATATTCCTTGGTGATATTCTGCATATTGGAAGTATAATTGGAGCCACAATAATCACAATTGGTCTTTATGCTGTATTATGGGGCAAAGCAACAGAAAAGATAGAGGAAGATGTTGAAACTATTGAAATGGCTTTACTTACTTTGTTCAAAGCAGCCACACTTCAAGGGATGAACAACCATGTCTTTGTTGCATATTCTTATGCTGTTGGTACTTCTGTTCTTCTTCCTGTCACACTTTTCACTAGAAGCAGAAGGTCAATAGTGGTTCCTCCACTCAGTTTCTCCATAATATGCAAAATTGTACTTCTTGGTGCAATAGGATCTTCATCTCAGGTTCTGGGGTATATTGGTATTAATTACAGTTCTCCAACACTTGCTTCAGCACTTGCCAATCTGATACCAGCTTTCACTTTCATGCTAGCTGTCACATTCAGGATGGAAAAATTAGCTGCAAAGAGTAGAAGTAGTAAGGCTAAGGTAATGGGAAGCATAATCTCAATAGCAGGTGCTTTTGTATTGACTTTCTACAAGGGACCATCTATCATGAATTCCTCGTCACTTCATCAATCAATTGGCTTTCTCAAGTCAGTAGATTCAAATTGGGACGTCATTGCTGGCATTCTCCTAATAGTTGACTATTTTCTTTCTTCACTATGGTACATTTTAGTGGTGTATATCTTGAAAGAGTTCCCAGATGAACTAACTCTAACCTTGCTTTACACCACAACTGCCACCATCATATCTATAGTTGTAGCTTTGTTATCAGTGCCAAATGCAAGTGCTTGGAAAATAGGACTGAATCTCTCACTCATCTCCATTGTTTGTTCAGCCATTTTTGGAAAGTTTATAGGCATTACAGTTTGTGCCTGGACAGTCCGCTTAAAGGGGGTAGTCTATGTAACCTCATTCAAGCCACTTCAAATTGTTATTTCTGCTGGCTTAGGTGTTATTTTCCTTGGTGATACTCTTCATGTTGGAAGTATAATAGGAGCAACAATCATATCAATTGGCCTTTATGGTGTATTATGGGGCAAAGCAACAGAAGAGATAGAGGACGATGTTGGTTGTTTGGAGTCACCATCTAATGAGAATGCACCTCTTTTGCAAAGCTCTAGAACTCACACTTTTGACAATAAAACAAATGGAAATGTTTAA	2031	0.3821	MTRRWSFYMDFLPIVVIIGQETIEMALLTLFKAATLQGMNNHVFIAYAYGIGTTILLPITFFRRRLVPPLSFSIILKSVLLGAIGCSAQILGYIGINYSSPTLASAIGNLVPAFTFILAVIFRMENLAATRSSNAKVIGSIISIAGAFVMTFYKGPSIMNSSSPHQPIGFLMSVDSSWAIGGILLTIDFFLLSLRYIFQVHILKEFPDEVTLVLLYTITATIISTVVALLSVPNASAWKIGLNLSLISIVSSGIFGKFISSTAIAWSLNMKGAVYVTSFKPLQIVISVGLGVIFLGDILHIGSIIGATIITIGLYAVLWGKATEKIEEDVETIEMALLTLFKAATLQGMNNHVFVAYSYAVGTSVLLPVTLFTRSRRSIVVPPLSFSIICKIVLLGAIGSSSQVLGYIGINYSSPTLASALANLIPAFTFMLAVTFRMEKLAAKSRSSKAKVMGSIISIAGAFVLTFYKGPSIMNSSSLHQSIGFLKSVDSNWDVIAGILLIVDYFLSSLWYILVVYILKEFPDELTLTLLYTTTATIISIVVALLSVPNASAWKIGLNLSLISIVCSAIFGKFIGITVCAWTVRLKGVVYVTSFKPLQIVISAGLGVIFLGDTLHVGSIIGATIISIGLYGVLWGKATEEIEDDVGCLESPSNENAPLLQSSRTHTFDNKTNGNV	676

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g03818	676	Pfam	EamA-like transporter family	336	466	IPR000620	GO:0016020
	Mepo5g03818	676	Pfam	EamA-like transporter family	26	151	IPR000620	GO:0016020
	Mepo5g03818	676	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	541	637	-	-
	Mepo5g03818	676	PANTHER	WAT1-RELATED PROTEIN	330	650	IPR030184	GO:0016020\|GO:0022857
	Mepo5g03818	676	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	226	321	-	-
	Mepo5g03818	676	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	360	469	-	-
	Mepo5g03818	676	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	50	154	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo5g03818	Mepo-Chr5	47663786	47672923	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo5g03818	330	666	Nodulin-like Gene Family	AT3G28050	48.000	6.70e-96	298

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g03818	-		-	tpra:123906528	494.197

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