Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03801 ATGTATGGGTTTGGTGGTGAGAAGAAGTGGAAACACAATCGGCACATGTGGCCTGTACCTTCTAACCCGACCACTGTAGTCACCGTTTCTTCACCGTCAAAATTTATATGCAAAGATGGACGCAAGATTCGTGTTGGTGACTGTGCACTATTCAAACCTCCCCAGGACTCGCCTCCTTTTATTGGAATAATTCGCAAGTTAATATTTAATAAAGAAGAAAGTCCAACTTTAGAAGTGAATTGGTTTTACCGACCTGCTGATTTGAAGCTCTCTAAAGGGATTGCAGTGGAAGCTGCACCAAACGAAGTCTTCTACTCCTTTCACAAGGATGAGACACATGCTGCATCATTACTCCATCCTTGCAAAGTCGCATTTCTCCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTTTGTAGACGAGTGTACGACATTGACAACAATTGTTTACGGTGGCTAACTGATAAGGACTTTGTTAATGATCAGCAGGAAGAAGTTGACCACCTATTAGACAAGACAAAACTAGAAATGCATGGGGCTGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCAACGTCAACACAGTCATTGAAATCTAGTTCTGATAACATTCAAAATAGTTCTTCCTTTGGTGTACAGGGTAAGGGAAAAAAGAGAGAGCGAGGTGATCAGGGATCTGATTCATCTAAAAAAGAGCGATTATTTAAGGTAGAAGTTGGAGATTCTGGTCAGTTTAGACTGGAGATGCTAAGGACCGAGATTGCTAGAATCACTGAAAAAGGCGGGCTTGTGGACTTTGAAGGGGTTGAAAAATTTGTACAGCTCATGCAACCTGATAGTGCTGATAAAAAAATTGATTTGGCTGGGAGAACGATGCTTGTTGACGTCATATCGCTCACGGAACATTATGACTGTCTTGGCTGGTTCGTACAGCTTCGTGGTTTGCCTGTGTTAGATGAATGGCTACAAGAGGTCCATAAGGGGAAAATTGGCGATGGTAATGTTGATAAGTCTGAAGAATTTTTGTTAGCTTTACTCCGTGCATTGGATAAGCTTCCTGTGAACCTTCATGCACTACAAACCTGTAATGTTGGAAAATCTGTTAATAATTTACGCAGCCACAAAAATTCTGAAATTCAGAGGAAAGCCAGGAGTTTGGTAGACACATGGAAAAAGCGTGTTGAAGCAGAAATGAATATGACTGATACAAAACCTGGTTCAACCCGTGCTGTTTCTTGGCCCACAAAGCCATCACCGTCAGATGTTTCTCACTCTGGAAATAGGAGAACCGGAGGATCCTCTGAGAATGTTGCGAAGAGCTCTCCTATTCAACCTTCAGCATCCAAAAATTCCCAATCTAAACATAATTCTGGAGAAGTACTATCCAAGTTCTCTTCATCCCCTGGCTCAACTAAATCAATGACTGCCTCAGTAGGCAGCAACACAAAAGATCAAAATGTTAAACTCATTGTGGGTGCAACAACATCAGATCTACCTCTGACACCCATCAAGGAGGAGAGGAGCAGTAGTTCTAGTCAATCTCAAAACAACAGCAGATCTTGTTCTAGTGAACATGCGAAGAGCTCCACTGCAGGGTCAATAAGTGGGAGCAAAATTCCTGGTAATGCTTCCCGATCTCGAAAGTCGAGTAATGGTATACATGGAGTTGGCGTTGCTGTAGTTCTGAAGGACCATAGCTCTGCCAAGAATTCAACAAGAAATTCACCTTCTGATAAAGTTTCGCCAACCAGAATGTCCCATGAAAAACCATCTGATCAGCCCGTTACCGATCAAGGGCATAATCAGCGACTGATTGTGAGATTGCCTAACACTGGGCGCAGTCCTTCCAGGGGAGCTAGTGGGGGCACTTTTGAAGAACCTGCTATTACATGTGGCAAAACATCACCTCCTGCCGACAAAAATGATAATCAGGATAGGAGAGTTAAAGCTAAAACTGATTGTTTGCAAACCCATGCGTCGAATGTGATGAATGATGCATCCAATGCTAAGGAAATTACTGGTTGTGATGAAGCTAAGTGCTCTCCACGAGCGGATGAGCGGTGCAGGGCTAATGAAGATGGTGATAAAGTAGCAGAAACGTCAAAAACAACCAGTTCGTCAACTGGATTTGTTTCCAGATCAGGGCAGACTTATGATGCTTCTTTAAGCCCCATGAATGCATTAGTTGAGAGCTGTGTGAAATTTTCTGAAGCAAGTTCCTCTGTGTCCCCCGGAGATGATGGTATGAATCTGCTTGCTTCTGTGGCTGCAGGAGAAATGTCTAGATGTGAAAATGTCTCACCTCTGCCTTCACCCGAGAGGAAGTCTCCTGCAGCTGATGAATCAAGCTCAGGGAATGATCGACAGTCCTTTGAAGCAGCTGGTCGCACTCAGAGACAGTCTGATGGTGGGGCTACCGGAGAGCATCCTGTGAATGCTTTGCAATTCAAAAATAATTCTAGGCATCTGGTGACTTCAGTATCGCGTGATTTTTCAGATGGTGAAGCCGTTTCATCTAGCTGTGTGGAGAAAACCGGTGATGGTAAAACTCAAGTAAATTTCTCTACTACAGACGCAATACAGAATGCTGGAGGTCCATGCTTACGGCCTGACACCAAAGAGGATACGTCTGAAACTGTATTTCCAGGCAAAAAGGAGTCTCATGCAGAAGCGGGAGGCGCAGAGGGTTTTCATGAGAGGAGGGAATTGGGAACTCAATGGCCTAAAAACAGCAGTAGTCCAGGCTCTAAAAAGTCGAGGACTTCCTCTTTTGATGATGATCAGAAGACTGATAACATGGATGGCGGTTTCACAGAGCACGGGAAAATGTTAGTTTCAGAAACCGTTGCAAGTGGTATGATTGAAAATGAACCAGGTAAAAGATCCCCCGAGTTATCTACAGGGGTAGATAGTAGGAGCCAGATCACTGCGGAGAAAGTGACGGGTATTATGCCTATGCAAAAAGGCTCTCCAGTTACAGATACCTGTGAGTCCATAGATGTGAAAAGGGAGGATGTTATGTTACCTGCTTCTAGTAGTGCTTTGACGGTATCCAGGGATGAAAATGCTAATAATGTGATGGAAGTTGAGAACAAACCTGCTGAGAAACGAATGGATCTGGATTCAGCAGTTGCAGATGTTGTTGATGAACGCTGTGAAGAGAATTCTGTTAGAAAAGAGCTCATTGGCGGTTCATCTATTCACTCAGAAATACCAATTACTTCTGAAAAGGAGAGCAACGTGCCCGAAACATGTGATTCTAATATAGAAGGAAAGAAATCTGTAGTTTCTGCAGAGTTGAATGCGGGCAACGGTAATCCATCCACAATTGCTAGTAGTTCCGATGCAGCTGTAAAACTGGACTTTGATTTAAATGAGGGATACCCAGTTGAAGATGCAGGCCAAGGGGATATTGTTAGACAGGAAGATCCTACCAGTTCATCTGCAGTTCATGTTCCTTGCCCATTGCCTTTTCCTATTCCATCCCTCTCTGGGGCCTTCCATGCTTCTATTACAGTGGCTTCTGCTACCAAAGGACCAGTTGTTCTACCAGAAAATCCATTGCGGAGTAAGGGGGAACTTGGATGGAAAGGTTCAGCTGCTACAAGTGCATTCCGGCCAGCTGAGCCTAGGAAAAATGCTGAGATGCCATCAAATACTGGTGATATTCCTTCCGTTGAAACGACATCAGTCAAACAAGGCCGTGCTCCTTTAGATTTTGATTTAAATGTGGCAGATGAAATAGGTTTTGAGGAAGTTGCTTACCGGGGTTCCTTAGAGTCTGGAGCACATGACCGCAGTGCTGTGGGACTTGATCTTGATCTTAACAGGTTAGATGAGACTCCTGAAGCTGGATCTTTCTCTATGGGTAAAATGGATATTCCTTCTTTACCAAGTAAACAACCTTCATTATCCAGTGGGTTATCTAATGGCGGAAGTGTCTCAAGAGACTTTGATTTAAATAATGGGCCAGGCCTTGACGAAGTTAGCACTGAAGTCCCAGCTCGTAGTCTGCAGATGAAAGGTGCTGTGCCATTTTCAAGTTCTGTTCATGGCACCAGAACAAATAACGCTGATTTTGGGAACTATTCTTCATGGTTTCCTCCAGGTAATTTGTATTCTGCAGTTACTGTCCCGCCACTTCTGCCTGGTAGAGGGGAACAGAGCTATGTTGGTGCTTCTGGACCACAGCGGATCATAGGTTCGACAGGTAGCTCACCCTTTAGTCCTGAGATGTACAGAGGGCCAGTACTTTCATCCTCTCCTGCTGTTGCGTATCCACCTACAACCCCCTTTCCATATCCGGGATTTCCATTTGATACCAATTTTCCATTATCTTCAAACGCCTTTTCTGGTTGTTCAACACAATTTATGGATTCATCAACTGTTAGTGGACTTTGCTTTCCTACTATGCCATCGCAGCCGGTTGGGCCTGGAGGCATTGTCTCATCTACATATCCCCGTCCTTATGTTATGAGTCTTCCAGGCAGTACAAGTAACGTAATTCCCGACAGCAGAAAATGGGGAAGTCAGAGTTTGGATCTTAATTCAGGCCCTGGTGGAACAGATGCCGAGCGCAGAGATGACAGATTGCCTTCAGGGTTGAGGCAGATGCCTGTCCCCAGTCCACAAGCCTCTATGGAGGATCACTTGAAGATGTTTCAGATGGCCGGTGCATTAAAAAGAAAGGAACCTGATGGCGGTTGGGATGGAACCGATAGATTCAGTTACAAACACCCCCCCTCATGGCAGTAG 4770 0.4453 MYGFGGEKKWKHNRHMWPVPSNPTTVVTVSSPSKFICKDGRKIRVGDCALFKPPQDSPPFIGIIRKLIFNKEESPTLEVNWFYRPADLKLSKGIAVEAAPNEVFYSFHKDETHAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIDNNCLRWLTDKDFVNDQQEEVDHLLDKTKLEMHGAVQSGGRSPKPLNGPTSTQSLKSSSDNIQNSSSFGVQGKGKKRERGDQGSDSSKKERLFKVEVGDSGQFRLEMLRTEIARITEKGGLVDFEGVEKFVQLMQPDSADKKIDLAGRTMLVDVISLTEHYDCLGWFVQLRGLPVLDEWLQEVHKGKIGDGNVDKSEEFLLALLRALDKLPVNLHALQTCNVGKSVNNLRSHKNSEIQRKARSLVDTWKKRVEAEMNMTDTKPGSTRAVSWPTKPSPSDVSHSGNRRTGGSSENVAKSSPIQPSASKNSQSKHNSGEVLSKFSSSPGSTKSMTASVGSNTKDQNVKLIVGATTSDLPLTPIKEERSSSSSQSQNNSRSCSSEHAKSSTAGSISGSKIPGNASRSRKSSNGIHGVGVAVVLKDHSSAKNSTRNSPSDKVSPTRMSHEKPSDQPVTDQGHNQRLIVRLPNTGRSPSRGASGGTFEEPAITCGKTSPPADKNDNQDRRVKAKTDCLQTHASNVMNDASNAKEITGCDEAKCSPRADERCRANEDGDKVAETSKTTSSSTGFVSRSGQTYDASLSPMNALVESCVKFSEASSSVSPGDDGMNLLASVAAGEMSRCENVSPLPSPERKSPAADESSSGNDRQSFEAAGRTQRQSDGGATGEHPVNALQFKNNSRHLVTSVSRDFSDGEAVSSSCVEKTGDGKTQVNFSTTDAIQNAGGPCLRPDTKEDTSETVFPGKKESHAEAGGAEGFHERRELGTQWPKNSSSPGSKKSRTSSFDDDQKTDNMDGGFTEHGKMLVSETVASGMIENEPGKRSPELSTGVDSRSQITAEKVTGIMPMQKGSPVTDTCESIDVKREDVMLPASSSALTVSRDENANNVMEVENKPAEKRMDLDSAVADVVDERCEENSVRKELIGGSSIHSEIPITSEKESNVPETCDSNIEGKKSVVSAELNAGNGNPSTIASSSDAAVKLDFDLNEGYPVEDAGQGDIVRQEDPTSSSAVHVPCPLPFPIPSLSGAFHASITVASATKGPVVLPENPLRSKGELGWKGSAATSAFRPAEPRKNAEMPSNTGDIPSVETTSVKQGRAPLDFDLNVADEIGFEEVAYRGSLESGAHDRSAVGLDLDLNRLDETPEAGSFSMGKMDIPSLPSKQPSLSSGLSNGGSVSRDFDLNNGPGLDEVSTEVPARSLQMKGAVPFSSSVHGTRTNNADFGNYSSWFPPGNLYSAVTVPPLLPGRGEQSYVGASGPQRIIGSTGSSPFSPEMYRGPVLSSSPAVAYPPTTPFPYPGFPFDTNFPLSSNAFSGCSTQFMDSSTVSGLCFPTMPSQPVGPGGIVSSTYPRPYVMSLPGSTSNVIPDSRKWGSQSLDLNSGPGGTDAERRDDRLPSGLRQMPVPSPQASMEDHLKMFQMAGALKRKEPDGGWDGTDRFSYKHPPSWQ 1589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03801 1589 Gene3D - 25 246 IPR043151 -
Mepo5g03801 1589 Pfam BAH domain 42 147 IPR001025 GO:0003682
Mepo5g03801 1589 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1589 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 1303 1317 - -
Mepo5g03801 1589 SMART BAH_4 41 156 IPR001025 GO:0003682
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 506 556 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 694 720 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 1567 1589 - -
Mepo5g03801 1589 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 308 412 IPR035441 -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 570 586 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 705 720 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 190 218 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 1287 1317 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 876 910 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 219 238 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 503 649 - -
Mepo5g03801 1589 SMART TFS2_5 327 401 IPR003617 GO:0005634
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 401 485 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 406 485 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 767 823 - -
Mepo5g03801 1589 ProSiteProfiles TFIIS N-terminal domain profile. 321 402 IPR017923 -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 925 941 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 865 977 - -
Mepo5g03801 1589 ProSiteProfiles BAH domain profile. 41 156 IPR001025 GO:0003682
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 1198 1232 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 1507 1523 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 1507 1553 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 782 810 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 835 854 - -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 180 238 - -
Mepo5g03801 1589 Pfam TFIIS helical bundle-like domain 350 399 IPR017923 -
Mepo5g03801 1589 MobiDBLite consensus disorder prediction 600 623 - -
Mepo5g03801 1589 CDD TFIIS_I 331 400 - -
Mepo5g03801 1589 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 274 403 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03801 Mepo-Chr5 47490785 47498467 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mepo5g03801 BAH 2.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03801 - - gmx:112998769 2174.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g03801 5 47490785 47498467 Mepo5g03801 5 47490785 47498467 ECH