Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03794 ATGTCTTCTTCCTCATCCAGTACTACGTGGAATGTGGAAGACAACAAAGCTTTTGAGAGAGCTTTAGCAGTTTATGACAAAGACACACCTGAACGTTGGTACAATATTGCTAAGGTTGTTGGTGGAAAAACTCCTGAACAAGTCAAGAGCCATTATCAACTCCTTCTCCAAGATATTTACCTTATTGAATCAGGCCAAGTTCCCTTTCCTTCCTACACCAACCCTAAACATCCCACTTGA 240 0.4125 MSSSSSSTTWNVEDNKAFERALAVYDKDTPERWYNIAKVVGGKTPEQVKSHYQLLLQDIYLIESGQVPFPSYTNPKHPT 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03794 79 ProSiteProfiles Myb-like domain profile. 2 56 IPR001005 -
Mepo5g03794 79 CDD SANT 9 56 IPR001005 -
Mepo5g03794 79 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Mepo5g03794 79 ProSiteProfiles SANT domain profile. 5 52 IPR017884 -
Mepo5g03794 79 FunFam Transcription factor SRM1 2 69 - -
Mepo5g03794 79 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 74 IPR044636 GO:0003700
Mepo5g03794 79 SUPERFAMILY Homeodomain-like 8 64 IPR009057 -
Mepo5g03794 79 Gene3D - 1 69 - -
Mepo5g03794 79 SMART sant 6 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03794 Mepo-Chr5 47400052 47400291 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo5g03794 Myb_DNA-binding 8.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03794 - - aprc:113867554 122.864