Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03779 ATGAGAAGATCGAAAGGTCGTAGCCGAGGTCAGCACCTCCGTGACAGTGTCCATACCAGTTCTCTACCAGACAGCATCAAGGATGATTATAGATGTCCGATAACTAGACCTGATAGGGGTGGAAAAGATGGCCAATCATACAAGTTATGTTCGCACAGTATCAACAATTCTATGACAGTTGTGACAGGCCGTGCGATTATTCCTCCATCACTGAAGTTAGATGGAAATTTGAGCATGGAAGGAAAGCTGGTTGAACATTGGGCTATTTTAGATTTTACCGACGATGAGCATGATAATATAACCAACTTCATTGAGGCTCTTCGACACAAATTTACAAGTTTAGGCATTAACATGGAGCAGCCGTTGAAAATATTCAAGTTGGAAAATTCAGATTCACTTGGTGAATTGCTTAGCAGAATTAAGACAATAAATGGAAGACGGTTGCAACTTCTGCTTTGCATAATGTCAAAGAATAATAAAGTTTACAAGTTGCTGAAATTTCTAGCAGAAACTGAGATTGGTATAGTGACCCAGTGTTGTCGCCTTACTCCCTATAATGCGAGGTCAGGTGCATTTCTAACGTCTCTTGCTCAAAAGATAAATGTCAAGATGAGAGGGAGAAATGTGGATAAAGGACTACTCCCATTCTTTGATTATGAAGAACATGTTATGCTTGTAGGGGCTGATGTGAATCATCCTGCTTCCAAGGATCGCAGTGGGAGTCCATCGATTGCAGCAGTTGTTGTGACAGTCAACTGGCCTGCCACAAATAAGAGTGTCGATGTGAAAATTTCAAATTTCGGAGCAATTTGCTTTGATCTTGTTGGAAATTATGAGAAGCTGAACAATATTAAACCTAAAAAAATAATCGTATTTCGGGATGGTGTCTCTAGGAAAGAGTTTTCCATGGTCCTGAATGTGGAGTTGGAGGACCTGAAGAGAGTTTTTGGTGGCTTTAATTACCATCCGACCATTACTGTTGTGGTAGCTGTGAAGGGGCATAGAACCCATTTCTTTCCTATGTCTCCAAAGGATGGAGATGTCACAAGTAACGTGCTGCCCAGCACAGTTGCGGACACTCTGCTGATTGATCCTTCTGAGTTCGCCTTTTTCCTCTACAGTCAGTCACGAATGCAGGCTACAAGCAAACCCACGCGTTACCATGTTTTGTGGGATGAAAACAAGTTCAGTTCGGATGAACTGCAAAGATTGATCTATGCATTATGTTTTAGCTCACCAAGGTGCAATGAAGCTGTGCGCTTAATCCCGCCTGTCCACTATGCAGACCTTGCTGCATATAGAGGACGTCAATATTTTGATGCAATGGTGCTTTCTCAACCTATATATTCAGATGCATCTTCGTCTTCATCAACTGTTTCAAATCCAAACGTTCCCCAGTTTCTTAAGTTGCATCCAGATATGGAAAACCTAATGTACTTTGTCTGA 1446 0.4163 MRRSKGRSRGQHLRDSVHTSSLPDSIKDDYRCPITRPDRGGKDGQSYKLCSHSINNSMTVVTGRAIIPPSLKLDGNLSMEGKLVEHWAILDFTDDEHDNITNFIEALRHKFTSLGINMEQPLKIFKLENSDSLGELLSRIKTINGRRLQLLLCIMSKNNKVYKLLKFLAETEIGIVTQCCRLTPYNARSGAFLTSLAQKINVKMRGRNVDKGLLPFFDYEEHVMLVGADVNHPASKDRSGSPSIAAVVVTVNWPATNKSVDVKISNFGAICFDLVGNYEKLNNIKPKKIIVFRDGVSRKEFSMVLNVELEDLKRVFGGFNYHPTITVVVAVKGHRTHFFPMSPKDGDVTSNVLPSTVADTLLIDPSEFAFFLYSQSRMQATSKPTRYHVLWDENKFSSDELQRLIYALCFSSPRCNEAVRLIPPVHYADLAAYRGRQYFDAMVLSQPIYSDASSSSSTVSNPNVPQFLKLHPDMENLMYFV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03779 481 SMART Piwi_a_2 150 440 IPR003165 GO:0003676
Mepo5g03779 481 ProSiteProfiles Piwi domain profile. 150 440 IPR003165 GO:0003676
Mepo5g03779 481 Pfam Piwi domain 151 438 IPR003165 GO:0003676
Mepo5g03779 481 MobiDBLite consensus disorder prediction 1 45 - -
Mepo5g03779 481 MobiDBLite consensus disorder prediction 21 45 - -
Mepo5g03779 481 SUPERFAMILY Ribonuclease H-like 134 440 IPR012337 -
Mepo5g03779 481 Gene3D - 218 481 IPR036397 GO:0003676
Mepo5g03779 481 Gene3D - 78 210 - -
Mepo5g03779 481 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 25 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03779 Mepo-Chr5 47225094 47227306 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03779 79 480 Eukaryotic Initiation Factors Gene Family AT5G43810 32.063 6.46e-64 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03779 K11593 - gmx:100805250 412.149