Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03770 ATGTCCACGCTGCAATCATCTTCCTTCTCCTGCAAATTTACTTATGATGTGTTTCTTAGTTTCAGAGGATCTGACACTCGCTCTGGTTTCACCGGCAATCTCTACAAAGCTCTATGTGATCGTGGAGTTCATACTTTCATTGATAACGAGGAGCTTCCAAGAGGGGACGAAATAAAACAATCACTTGTGAAAGCCATTGAAGAGTCCAATATTTTGATCCCTGTTTTCTCTACCAATTATGCTTCTTCTTCATTTTGTTTGGATGAACTTGTCCACATCATTCATTGCTCCAAGTCAAAGGATCGCCGCTTGGTTCTACCAGTTTTCTATAACATAGATCCTACTCATGTACGACATCAGACCGGAAGCATCGGTGAAGCATTGGAGAACCATGAAGTGAAGTTCCAAAATAATGATACATATTATATGGAAAGGCTGCTGAAATGGAAGATGGCTCTTAAACAAGCAGCTGCGCTTTCCGGCTACCACTTCGATCTTGCTGGGACTGGATATGAATACAAGTTTATTCAGGAGATAGTTGAAGAGGTCTCCCGAAAGATCAGTCGTGAACCTCTATATGTTACTGAGTACCCTGTTGGACTGGAATCTCAAGTACTAAAAGTAAAGTCACTTATGGACGGTAGCCATGATGCTGTCCAGATGATTGGGATTCATGGGATTGGTGGAATAGGAAAAACAACACTTGCAAAAGAGATTTATAATCAGATTGGCCATCAATTTGATGAGCTGTGTTTCCTTCCTAACGTGAGAGAAATTTGTTTGACTAAGCGTGGCCTAGAACATCTCCAGGAGCAGCTCCTCCACAAAATAGTTAGGAAAGAAATTATGTTACAAGATTTCAGTGAGGGAATTCCAATCATAAAGAAGAGACTGCAAGGAAAAAAGGTGATCGTTACCACCCGAGATACACATTTGTTAGCAAGTCATGGAATTAAAATAAGATATGAAGTGAATGAGTTAAATGAGAAAGATGCACTTGACTTGTTGAGGTGGAAGGCTTGTGAAAATAACAAAACTGGTACAAGTCGTGAGGACATTTTAGAACGTGTATTAACATATTCCTCTGGCCTTCCATTAGCTTTAGAAGTAGTGGGTTCTGACTTGTCTGGAAAGTCTATAGAAGAATGGAGTTCTACATTGGATCGATATAAAAGGACTGTTCCTAAAGATATCCAACAGATACTTAAAGTCAGCTTTGATGCTTTGCAGGATGAAGATAAGAGTCTCTTTCTCGACATTGCTTGTTTTTTCAAAGGATGTAGACTGGAAGAGTTCAAAGATATACTTGATGCTCATTATACTTATTGCATCAAAAATCATATTGGAGTGTTGGTTGAAAAATCTCTCATAAAGATTATTGGCGGTTGTGTGACATTACATGACTTGATAGAGGAAATGGGTAAAAAAATTGTGCTACAAGAATCACCAAAAGAGCCTGGAAAACGTAGTAGGTTGTGGTCCCATGAAGATATAGTTCATGTTTTACAAGAAAATTCGGGAACAAGTCAAATTGAAATTTTGTACCTGAATTTCCCATTGTCTAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGTAGAATGGGAAGGAGATGAATTGAAGAAGATGGAAAACCTTAAAACAATTATCATCCATAATTGCTGCTTTTCCAATGGTTGTCAACATCTTCCAAATAGTTTAAGAGTGTTGGATTGGCCTAGATATCCATCAGAGAGTTTACCATCTGATTTTTGTCCAAGGAAACTTTCCATATGCAGGTTACGTGAAAGCAGCCTCACAACATTTGAGTTTCTTCGTAGCTCATTCAAAAAGTTCGTGTTTATGAGAGAGTTAAATTTAGACTACAGTCAATTTTTAACACACATACCAGACATATCTGGTCTCTTAAATTTGGAAATACTTTCATTTCAAGATTGTTGGAATTTAATTACAATTCACGATTCTATTGGGTTCTTGAATAAACTCAAAATCTTGAACGTTATTGGTTGCAGCAAACTTAGGAGTTTTCCGCCCATAAAGTCGACATCACTTCAAAAACTTGAACTTTCACATTGTACTGATCTCAAGTGTTTTCCAGAAATAGTAGGAGATATGAAACATATAACATATATTGAATTGGTTGGCACCTCCATAGAACAATTTCCATTTTCATTTCGAAATCTCTCCATGGTCCATACTCTACGAATATTTGGAAGTGGAATGCCTCATAATTTGTCTTGGATTAATGCTCATGAGAATGATAAACCGAGCTCCATGGTGTCTTCAAATGTTCAATTCCTTCATCTCATAGAATGCAATCCGTCAAATGAATTTCTTCGAAGGTTTGTCAATGTAAAAGTTTTGGACCTATCGGGAAGTGATCTCACTGTTCTTTCAGAATGCCTAGAAGAATGTCAATTTTTACAAAGACTTTGTTTGAATAATTGCAAGTATCTCCAAGAAATCACAGGGATTCCGCCAAGTTTAAAACGTTTGTCTGCATTACACTGCAATTCACTGACTTCCTCATGTAGAAGCATGCTACTTAGTCAGGATGTGCATGAAGATGGAGGCACCGAGTTTAGTTTGGCAGGAAGTTCTAGGATTCCAGAGTGGTTTGATCACCAAAGCAAGGGACCATCAATTTCTTTCTGGTTTCGTGACAGGTTCCCTTCCATAGCTCTCTTCGTTGCTAGTCTATCAACGGATAACAAGCATCCCAACAGTGATTTTCTTTCATTAACAGCCTATCTGAGAACCTATACCGATGGTATTGATTTTGACATCAACAGTGTCGATCTCAATCTCGTGATACAACCAGATCATACATATCTATATGATTTGCGGCTGCAAGAAATGAATCTCGAATCTGTAGTGGGCAAAGCACTTTTAATAGATGAATGGTTCCATGCAGAGATTAAGTTTGAGTATGAGGGTGGCATAGAGGAAGCATTGCTTATAGAAAGTGGAATTCACGTATTCAAACTGAAAAGTAGTATGCAGGATATTCGATTCACTAATCCGTATGAATGA 3051 0.3792 MSTLQSSSFSCKFTYDVFLSFRGSDTRSGFTGNLYKALCDRGVHTFIDNEELPRGDEIKQSLVKAIEESNILIPVFSTNYASSSFCLDELVHIIHCSKSKDRRLVLPVFYNIDPTHVRHQTGSIGEALENHEVKFQNNDTYYMERLLKWKMALKQAAALSGYHFDLAGTGYEYKFIQEIVEEVSRKISREPLYVTEYPVGLESQVLKVKSLMDGSHDAVQMIGIHGIGGIGKTTLAKEIYNQIGHQFDELCFLPNVREICLTKRGLEHLQEQLLHKIVRKEIMLQDFSEGIPIIKKRLQGKKVIVTTRDTHLLASHGIKIRYEVNELNEKDALDLLRWKACENNKTGTSREDILERVLTYSSGLPLALEVVGSDLSGKSIEEWSSTLDRYKRTVPKDIQQILKVSFDALQDEDKSLFLDIACFFKGCRLEEFKDILDAHYTYCIKNHIGVLVEKSLIKIIGGCVTLHDLIEEMGKKIVLQESPKEPGKRSRLWSHEDIVHVLQENSGTSQIEILYLNFPLSKKEEEEEEEEEEEEEEEVEWEGDELKKMENLKTIIIHNCCFSNGCQHLPNSLRVLDWPRYPSESLPSDFCPRKLSICRLRESSLTTFEFLRSSFKKFVFMRELNLDYSQFLTHIPDISGLLNLEILSFQDCWNLITIHDSIGFLNKLKILNVIGCSKLRSFPPIKSTSLQKLELSHCTDLKCFPEIVGDMKHITYIELVGTSIEQFPFSFRNLSMVHTLRIFGSGMPHNLSWINAHENDKPSSMVSSNVQFLHLIECNPSNEFLRRFVNVKVLDLSGSDLTVLSECLEECQFLQRLCLNNCKYLQEITGIPPSLKRLSALHCNSLTSSCRSMLLSQDVHEDGGTEFSLAGSSRIPEWFDHQSKGPSISFWFRDRFPSIALFVASLSTDNKHPNSDFLSLTAYLRTYTDGIDFDINSVDLNLVIQPDHTYLYDLRLQEMNLESVVGKALLIDEWFHAEIKFEYEGGIEEALLIESGIHVFKLKSSMQDIRFTNPYE 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03770 1016 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 189 - -
Mepo5g03770 1016 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 162 IPR035897 -
Mepo5g03770 1016 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 707 IPR044974 GO:0006952
Mepo5g03770 1016 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 420 IPR027417 -
Mepo5g03770 1016 PRINTS Disease resistance protein signature 361 375 - -
Mepo5g03770 1016 PRINTS Disease resistance protein signature 221 236 - -
Mepo5g03770 1016 PRINTS Disease resistance protein signature 685 701 - -
Mepo5g03770 1016 SMART till_3 14 159 IPR000157 GO:0007165
Mepo5g03770 1016 Gene3D - 189 303 IPR027417 -
Mepo5g03770 1016 Gene3D - 326 410 IPR042197 -
Mepo5g03770 1016 Gene3D - 12 188 IPR035897 -
Mepo5g03770 1016 ProSiteProfiles TIR domain profile. 13 187 IPR000157 GO:0007165
Mepo5g03770 1016 SUPERFAMILY L domain-like 482 850 - -
Mepo5g03770 1016 Gene3D Ribonuclease Inhibitor 469 748 IPR032675 -
Mepo5g03770 1016 Pfam TIR domain 15 188 IPR000157 GO:0007165
Mepo5g03770 1016 Coils Coil 520 552 - -
Mepo5g03770 1016 Pfam NB-ARC domain 294 401 IPR002182 GO:0043531
Mepo5g03770 1016 Pfam NB-ARC domain 208 292 IPR002182 GO:0043531
Mepo5g03770 1016 Gene3D Ribonuclease Inhibitor 763 857 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03770 Mepo-Chr5 47140771 47145197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03770 9 804 WRKY Transcription Factor Family AT4G12020 28.488 6.81e-61 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03770 - - mtr:11433967 1523.06