Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03766 ATGGCTATGCTGCAACCATCTTCATCCTCATGCAAATTCAGCTATAACGTTTTCCTGAGTTTCAGAGGACTTGACACTCGCCATGGTTTTACCGGAAATCTATACAACGCTCTGAGTAAAAGTGGAGTCCACACTTTCATGGATCACGAGGAGCTTCCACGAGGAAACGAAATAAAACCATCACTTATAAAAGCCATTGAAGAGTCCAGAATTTTCATCCCTGTTTTCTCAAAGAACTATGCTTCTTCTTCATTTTGTTTGGATGAACTTGTCCACATCATTCATTGCTACAAAACAAAAGGACGCCCGGTTCTGCCAGTTTTCTATGATATAGCTCCTACTGATCTACGAAAGCAGACTGGAAGCATCGGTGAAGCACTGGCGAAGTTTGAAAAGGAGTTTGAAAATGACAAAGTTAACATGGAAAGGCTGCAGAAATGGAAGATGGCTCTTACACAAGCAGCTGATTTATCCGGCGACCACTTCTGTCTTGGGGATGATTATGAAAACAAGTTTATTAAGGTGATAGTTGAAGAGGTCTCCCGAAGGATCAACCGTATACCTCTACATGTTACAGAGTACCCTGTTGGACTGGAATCTCAAGTACAAAAAGTAGAGTCACTTATGAAAGGTAGCCATGATGGTGTCCAGATGATTGGGATCCATGGGATGGGCGGAATAGGAAAAACAACACTTGCAAAAGAGATTTATAATCAGATTTATAATAAATTTGATGAGGTGTGTTTCCTTCATGACGTGAGAGAAATTTGTTCGACTAAACGTGGCTTAGAACATCTCCAGGAACAGCTCCTCTCCAAAACAGTTGGGCTAGACATTAAGTTAGGAGATGTTAGTGAGGGAATTCCAATCATAAAGGAGAGACTACAACGAAAAAAGGTTTTGTTGATTCTCGATGATGTTGACCAACTGAAACAACTCAAGGCTTTGGCTGGAGGACTTGATTGGTTTTGCGGTGGTAGCAAGGTGATCGTTACCACCCGAGATACACACTTGTTAGCAAGTCATGGGATTAAAATAACATATGAAGTGAATGAGTTAAATGAGAAAGATGCAAATGACTTGTTGAGGTGGCAGGCTTGTAAAAATATCAAAACTGGTACAAGTCACGAGGACATTTTAGAACGTGTATTAACGTATTCCTCTGGCCTTCCATTAGCTTTAGAATTAGTGGGTTCTGACTTGTCTGGAAAGCCTATAGAAAAATGGAGTTCTACATTGGATCAATATAAAAGGACGGTTCGTAATGATATTCAACAAATACTTAAAGTCAGCTTTGATGCTTTGGAGGAGGAATATAAGAGTCTCTTTCTAGACATTGCTTGTTTCTTCAAAGGATGTAGACTTAAAGAGTTCAAAGATATACTTGAGGCTCATTACGGTTATTGCATCGAAAATCATATTGGAGTGTTGGTTGAAAAATCTCTCATAAAGATTCTTGGGGGTTGTGTGACATTACATGACACGATAGAGGACATGGGTAAAAAAGTTGTACTACAAGAATCCGAAGAGCCTGGAAACCGTAGTAGGTTGTGGTCCCATGAAGATATAGTTCATGTTTTACACCTAAATTCGGGAACATGTAAAACTAAAATTTTATACCTGAATTTCCCATCATCTAAAGAAGAAGAAGAGGTAGAATGGGAAGGAGATGAATTGAAGAAGATGAAAAACCTTAGAACAATTATCATCCGAAATTGCCGCTTTTCCAATGATTGTCTACATCTTCCAAATGGTTTAAGAGTGCTGGATTGGCATAGATATCCTTCAAAGAATTTACCATCTGGTTTTCGTCCACGGGAACTTTCCATATGCAGGTTACGTGAAAGCAGCCTTACAACAATTGAGTTTCCTAGCTCATCCAGAGTAGGTGTAATGATTTCATTTTCCTCATCTTGTGTACCATCTCACTACTTTAAGATTACTCACTTTTTCTTTTCTCTCTTTTCTTTGTTTTTTTTCAGAAGTCTGTGCTTTTGA 1998 0.3899 MAMLQPSSSSCKFSYNVFLSFRGLDTRHGFTGNLYNALSKSGVHTFMDHEELPRGNEIKPSLIKAIEESRIFIPVFSKNYASSSFCLDELVHIIHCYKTKGRPVLPVFYDIAPTDLRKQTGSIGEALAKFEKEFENDKVNMERLQKWKMALTQAADLSGDHFCLGDDYENKFIKVIVEEVSRRINRIPLHVTEYPVGLESQVQKVESLMKGSHDGVQMIGIHGMGGIGKTTLAKEIYNQIYNKFDEVCFLHDVREICSTKRGLEHLQEQLLSKTVGLDIKLGDVSEGIPIIKERLQRKKVLLILDDVDQLKQLKALAGGLDWFCGGSKVIVTTRDTHLLASHGIKITYEVNELNEKDANDLLRWQACKNIKTGTSHEDILERVLTYSSGLPLALELVGSDLSGKPIEKWSSTLDQYKRTVRNDIQQILKVSFDALEEEYKSLFLDIACFFKGCRLKEFKDILEAHYGYCIENHIGVLVEKSLIKILGGCVTLHDTIEDMGKKVVLQESEEPGNRSRLWSHEDIVHVLHLNSGTCKTKILYLNFPSSKEEEEVEWEGDELKKMKNLRTIIIRNCRFSNDCLHLPNGLRVLDWHRYPSKNLPSGFRPRELSICRLRESSLTTIEFPSSSRVGVMISFSSSCVPSHYFKITHFFFSLFSLFFFRSLCF 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03766 665 Gene3D - 9 187 IPR035897 -
Mepo5g03766 665 SMART till_3 14 157 IPR000157 GO:0007165
Mepo5g03766 665 Pfam NB-ARC domain 202 434 IPR002182 GO:0043531
Mepo5g03766 665 Gene3D - 352 436 IPR042197 -
Mepo5g03766 665 Pfam TIR domain 15 185 IPR000157 GO:0007165
Mepo5g03766 665 Gene3D - 188 348 IPR027417 -
Mepo5g03766 665 ProSiteProfiles TIR domain profile. 13 184 IPR000157 GO:0007165
Mepo5g03766 665 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 621 IPR044974 GO:0006952
Mepo5g03766 665 PRINTS Disease resistance protein signature 218 233 - -
Mepo5g03766 665 PRINTS Disease resistance protein signature 560 576 - -
Mepo5g03766 665 PRINTS Disease resistance protein signature 387 401 - -
Mepo5g03766 665 PRINTS Disease resistance protein signature 294 308 - -
Mepo5g03766 665 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 159 IPR035897 -
Mepo5g03766 665 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 446 IPR027417 -
Mepo5g03766 665 SUPERFAMILY "Winged helix" DNA-binding domain 423 527 IPR036390 -
Mepo5g03766 665 SMART AAA_5 215 353 IPR003593 GO:0016887
Mepo5g03766 665 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03766 Mepo-Chr5 47129483 47132300 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03766 6 608 WRKY Transcription Factor Family AT4G12020 27.157 3.29e-52 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03766 - - mtr:11433967 891.338