Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03740 ATGGATGGAGGAACCACGGGATATAAGTGGCAAAAAAAGCCTGAGGAGGAGAAAATGCGGATCAAAAAGCGTGAATCGTATGACACTCCTTATCCAATGAATGCATTGCTAGTAGATGGTGTAACTGCAACCAGACGCTTAGAGCATCATATGCTTGAATCCATAGGCATCCGAACAGAGCCTGCAAATAGTGCTCAAGAAGCGATGCAAATTTTGTTGACTGGTGTCAAATTTGACTTCATATTTGTTGATTTTGATTTGCCAGTAATCAATGGACCTGGGTTGGTGAGGCAGATGCGTGCAATGGGGATACAGAGCAAGGTGGTTGGTATGTTAACAAACTTCAATGATCAAAATGTGCAAATGTTTGGAGAAGCAAGAGCTAATGCCAGCACCCCAAAACCTTTGACCCGAGAGAGTTTTGTGTTCATCACTGGGATCTTGCGCCGCATGTGA 456 0.4386 MDGGTTGYKWQKKPEEEKMRIKKRESYDTPYPMNALLVDGVTATRRLEHHMLESIGIRTEPANSAQEAMQILLTGVKFDFIFVDFDLPVINGPGLVRQMRAMGIQSKVVGMLTNFNDQNVQMFGEARANASTPKPLTRESFVFITGILRRM 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03740 151 Pfam Response regulator receiver domain 36 140 IPR001789 GO:0000160
Mepo5g03740 151 Gene3D - 10 144 - -
Mepo5g03740 151 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 140 - -
Mepo5g03740 151 SMART REC_2 33 145 IPR001789 GO:0000160
Mepo5g03740 151 ProSiteProfiles Response regulatory domain profile. 34 149 IPR001789 GO:0000160
Mepo5g03740 151 SUPERFAMILY CheY-like 32 142 IPR011006 -
Mepo5g03740 151 CDD REC 36 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03740 Mepo-Chr5 46722856 46723857 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03740 33 138 Response Regulator Gene Family AT3G04280 32.110 1.44e-10 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo5g03740 Response_reg 5.6e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03740 - K07647 tpra:123906480 185.652