Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03736 ATGATTTCACTTGTGCATGACCTGCTCATCCAAATTAAGGTATCGACTCCGGCGGATCACCTCAGCCGTGAAGAACGGCTTCCTTCGTGGGTTAAGGCGCTTCCTTCGTGGGTTAAGGCAAAGGATAGCAAGCAGTTGCAGAGAAATGATGTCCATAATGCTGATGTTATTGTTGCTAAAGATGGAAACTTTACTAGGGTGACTGATGTCGTATCTGCAGCCTCTGAAAAGAGCACAACACGCTACATAATACACATAAAAAAGGGTGTTTACCAAGAGGATGTCATCATCAATCAAGATAAGCGGAACTTAATGATGATTGGGGATGGCATGCATGCCAAAATCATCACTGGTAACCTGAATTTAAGGCAGGATAGAGTATTGATGAATCCATATACAATCCAAAAGGTCTATACCAATCCAAAAGTATATCTTGGAACAGTTCCTGTTGTGGCCATTGGAGTGGGCACTATGTAG 477 0.4277 MISLVHDLLIQIKVSTPADHLSREERLPSWVKALPSWVKAKDSKQLQRNDVHNADVIVAKDGNFTRVTDVVSAASEKSTTRYIIHIKKGVYQEDVIINQDKRNLMMIGDGMHAKIITGNLNLRQDRVLMNPYTIQKVYTNPKVYLGTVPVVAIGVGTM 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03736 158 ProSitePatterns Pectinesterase signature 1. 78 97 IPR018040 -
Mepo5g03736 158 SUPERFAMILY Pectin lyase-like 53 123 IPR011050 -
Mepo5g03736 158 PANTHER PECTINESTERASE 25 122 - -
Mepo5g03736 158 Gene3D - 12 148 IPR012334 -
Mepo5g03736 158 Pfam Pectinesterase 55 130 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03736 Mepo-Chr5 46694179 46695759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03736 34 119 Carbohydrate Esterase AT3G43270 53.409 3.23e-25 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03736 K01051 - psat:127103599 101.679