Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo5g03734 | ATGAAATTCAAACGACCCGTAGGTTCATCAAGTGCTGATTCCTCTGAAAATGGAGGCGGCGGTGGTGGAGGTGGAGTTGTTAATGGCAGTGGAGGTGCAAGTACTCCCAGGAAGCTGACAACCATTGATGCTTTATCTTATTTGAAGGAAGTGAAAAACACGTTTCCGGATCAAAAAGAAAAATATGACATGTTCCTTCAGGTCATGAAAGATTTCAAGGCTCAAAAGACTGACACTCATGGTGTCATAGCTGCTGTCAAGGAACTATTCAAAGGTCACAACAATTTGATTTATGGATTCAACGCTTACCTACCAAAGGGATATGAGATAAGACTTGATGAGGATGAAGCTCCTCCAAAGAAAGAGGTTGAATTTGAAGATGCTATTAGTTTCGTGGGCAAGATAAAGAAACGATTCGAAAATGATGAGCATGTTTACAAATCATTCTTGGACATTTTGAATATGTATCGCAAAGAACACAAGACCATTACTGAGGTTTACAGTGAGGTCACTACCCTTTTTAAGGACCATAGTGATTTGCTCGAGGAGTTCACTAGATTCTTACCAGATAATTCGCTAGCACCTTCCACACAACAAGCTCCATTAGGTCATCGTGATCTGAGTGTTGAACATGATAAGAGAGAATGCGGTGATTTGAACTCACTACGCTCTCCTAACAAAAAGAAATCTGTTAAGAAGGCTGAAGCTAATGGATTGTCTTCTGACTTTGCCTCTCATGACGATAAAGATGCGTTAAAGTTCATGTATAGTCAAGCATTAAGTTTATGTGAGAAAGTTAAGGAGAAGTTGAGCAGTGCCGAGGACTACCAAACATTCTTGAACTGCCTTCATAATTTTAGCAATGGAATAATAAAAAAGAATGATTTACAAAATACGGTGACCGATTTACTTGGAAAGCATTCTGATCTCATGAGCGAATTCAATGATTTCTTAGAGCGTTGTGAAAATATTGACGGGTTCCTTGCTGGTGTCATGAGTAAAAAGCCACTTGCCGCTGATGGTCATTTATCACGATCATCCAAGTTGGAGGACAAAGAACATAGGCGTGAGACTGATAAAGAGAAGGAAAGATACAAGGAGAAGTACATGGGAAAATCCATTCAAGAACTTGACCTTAGCGACTGCAAACGTTGTTCTCCGAGCTACCGGCTTCTACCGGCCGATTATCCAATTCCTACGGCTAGTCAGCGATCTGAGCTTGGTGCGCAAGTACTGAATGATCACTGGGTATCTGTGACTTCTGGAAGTGAGGATTACTCTTTCAAACATATGCGCAGGAATCAATACGAAGAAAGCTTGTTCAGATGTGAAGATGACAGGTTTGAGCTGGACATGTTATTAGAGTCTGTGAGTTCCGCTGCTAAACGAGCTGACGAGCTGTATAACAGCATTGTTGAAAATAAGATTAGTGTGGAGAGTCTAAGCCGTATTGAAGATCACTTCACTGTTCTGAATCTAAGGTGCATTGAACGCCTATATGGTGACCATGGTCTTGATGTCTTAGACATACTGCGTAAGAACCCAACTCATGCTCTGCCTGTAATATTGACTCGATTGAAGCAGAAACAAGAGGAGTGGAATAGATGTCGTTCAGATTTCAATAAAGTTTGGGCTGACATTTATTCTAAAAATCACTACAAATCACTTGATCATCGTAGCTTCTATTTCAAGCAACAAGATTCAAAGAACTTGAGCACAAAATCTTTGGTGACTGAGATCAAAGAAATTAAAGAGAAGCAGCAGAAAGAGGATGACATTGTTCAGACTATTGCTGCAGGAGCTAAACATCCTCTCATTCCACATTTCGAGTTTGACTTTTCTGATGCTGAAATTCACGAGGACCTGTATAAACTTGTTCGTTATTCATGTGAGGAAGTATTCCAAAGTAAAGAGTTATTCAATAAAATTATGAGGCTCTGGAGTACCTTCTTGGAACCGATGCTTGGTGTAACTTCCCAGTCGCATGAGACGGAAAGGGCTGAGGACAGGAAAGCAGGACATAATGCTCGAAGTTCTGTTGCACCTAACGTAGGAGGTGATGGAAGCCCTAACAGAGAGTCCAATTCAAGGCTACCAAAATCTGACAAGAATGAAGTTGATGGTAGAGTAGCAGAAGTTAAAAATGGTCACCGGACTAGTGTAGCTGCCAATGATAAAGAAAACGGTTCTGTTGGTGGTGAGCTTGTTAGTAGAGATGATCATTTAATGGATAATAAAGGGCAGAAAAGTGTTGAAAACAGTGATAAAGCCCCTGGATTTGTTAAACAGTTCTCCTCTGACGAACAAGCAGCGAGAAACTCTGCATCTGTCACAATTAGAGGTGAAAGCAGTGTGCATATGTCCCCAGGCCGTGTACTTACTCCAACCCGACCTACTGATGCCGATGTCTCTGTTGCTGTAGTCATAGCCAAGTCTCCGAGTGCTAATGTACCTTTGGTGGAGGGTGTTGCCGCTGCACCTCCAGTACCAGTGGCCAATGGCGTGTTAGTTGAGAACAGCAAAGTTAAAAGCAATGAAGAATCTTCTGTGCCTTGCAAAGTTGAAAAAGAAGAGGGTGAGTTATCCCCAAATGCTGACTCTGAGGAGGATAACTTTGTTGCCTATGGAGATTCAAATGCGCAGTCAAACCACAATGATGATAGAAGGAAATATGAGTCTAGAAATGGAGAGGACGAACACCGTCCAGAGGCTGGAGGTGATAATGATGCAGATGCTGATGACGAAGACAGCGAAAATGTTTCTGAAGCTGGTGAAGATGTGTCAGGTAGTGAGTCTGCTGGTGATGAATGCTCCCGGGAAGATCATGAGGAGGAAGATATGGAACATGATGATGTTGACGGTAAAGCCGAGAGTGAAGGTGAAGCAGAGGGGATGTGTGATGCTGATGCACAAACTGGAGTAGATGGCTCATCTTTACCATTATCAGAGAGGTTTCTGTCAACTGTGAAACCTCTCACAAAGCATGTATCTGCAGTTTCATTTGTTGAAGATGTGAAGGATTCAAGGGTGTTTTACGGAAATGATGATTTCTTTGTTCTCTTTAGGCTTCATCAAATTCTTTATGAAAGGATCTTATCTGCAAAAGAAAATTCAACAAGCGCTGAAATGAAATGGAAAACAAAAGATTCTAGTTCTACAGATCCTTACGCAAGATTTATGGATGCATTGTACAATTTGCTCGATGGATCCGCAGAGAATGCCAAGTTTGAAGATGAATGTCGAGCAATTCTTGGAAACCAGTCTTATGTGCTATTCACATTGGACAAGTTAATATATAAATTAATCAGACAGCTTCAAACTGTTGCAACGGATGAGGAAGACGCTAAGCTTCTCCAATTATACGAGTATGAAAAGTCTCGGAAACCTGGGAAATTAAATGATTCAGTATATCATTCAAATGCACATGTTATCCTTCATGAGGAGAACATATACCGGTTTCAATCTTCGTCTAGTCCTTCTCGGCTCTCGATCCAGCTCATGGACAATATGAATGAAAAGCCTGAGATTGCTGCTGTTGCTGTTGATCCAGATTTTTCATTTTATCTGCACAATGATTTTCTGTCTGTCCTCCCTGGCAAAAAGGAGCCTCATGGCATTTTACTGGAAAGAAACAAACCGAAATATGGGGACTTAGATGAGCTTTCTGCAATTTGTGCTGTAATGGAAGATGTCAAAGTAGTGAATGGATTGGAATGCAAGATATCTTGCAACTCATCCAAGATTTCTTATGTTCTTGACACACAAGATTTTTTCTTCCGACCAAGAAGGAAAAGACGAACACCATCATCATCATCATCAAGTACGGCATCTTCTCGGTCTCGCAGGGAAAGAGAGGAAAGATTCCGCAAATTCATGGCGTCCTCCACCTAA | 3891 | 0.4133 | MKFKRPVGSSSADSSENGGGGGGGGVVNGSGGASTPRKLTTIDALSYLKEVKNTFPDQKEKYDMFLQVMKDFKAQKTDTHGVIAAVKELFKGHNNLIYGFNAYLPKGYEIRLDEDEAPPKKEVEFEDAISFVGKIKKRFENDEHVYKSFLDILNMYRKEHKTITEVYSEVTTLFKDHSDLLEEFTRFLPDNSLAPSTQQAPLGHRDLSVEHDKRECGDLNSLRSPNKKKSVKKAEANGLSSDFASHDDKDALKFMYSQALSLCEKVKEKLSSAEDYQTFLNCLHNFSNGIIKKNDLQNTVTDLLGKHSDLMSEFNDFLERCENIDGFLAGVMSKKPLAADGHLSRSSKLEDKEHRRETDKEKERYKEKYMGKSIQELDLSDCKRCSPSYRLLPADYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSAAKRADELYNSIVENKISVESLSRIEDHFTVLNLRCIERLYGDHGLDVLDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWADIYSKNHYKSLDHRSFYFKQQDSKNLSTKSLVTEIKEIKEKQQKEDDIVQTIAAGAKHPLIPHFEFDFSDAEIHEDLYKLVRYSCEEVFQSKELFNKIMRLWSTFLEPMLGVTSQSHETERAEDRKAGHNARSSVAPNVGGDGSPNRESNSRLPKSDKNEVDGRVAEVKNGHRTSVAANDKENGSVGGELVSRDDHLMDNKGQKSVENSDKAPGFVKQFSSDEQAARNSASVTIRGESSVHMSPGRVLTPTRPTDADVSVAVVIAKSPSANVPLVEGVAAAPPVPVANGVLVENSKVKSNEESSVPCKVEKEEGELSPNADSEEDNFVAYGDSNAQSNHNDDRRKYESRNGEDEHRPEAGGDNDADADDEDSENVSEAGEDVSGSESAGDECSREDHEEEDMEHDDVDGKAESEGEAEGMCDADAQTGVDGSSLPLSERFLSTVKPLTKHVSAVSFVEDVKDSRVFYGNDDFFVLFRLHQILYERILSAKENSTSAEMKWKTKDSSSTDPYARFMDALYNLLDGSAENAKFEDECRAILGNQSYVLFTLDKLIYKLIRQLQTVATDEEDAKLLQLYEYEKSRKPGKLNDSVYHSNAHVILHEENIYRFQSSSSPSRLSIQLMDNMNEKPEIAAVAVDPDFSFYLHNDFLSVLPGKKEPHGILLERNKPKYGDLDELSAICAVMEDVKVVNGLECKISCNSSKISYVLDTQDFFFRPRRKRRTPSSSSSSTASSRSRREREERFRKFMASST | 1296 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo5g03734 | 1296 | MobiDBLite | consensus disorder prediction | 1263 | 1296 | - | - | |
Mepo5g03734 | 1296 | MobiDBLite | consensus disorder prediction | 938 | 952 | - | - | |
Mepo5g03734 | 1296 | ProSiteProfiles | PAH domain profile. | 252 | 321 | IPR003822 | GO:0006355 | |
Mepo5g03734 | 1296 | MobiDBLite | consensus disorder prediction | 696 | 714 | - | - | |
Mepo5g03734 | 1296 | SUPERFAMILY | PAH2 domain | 254 | 321 | IPR036600 | GO:0006355 | |
Mepo5g03734 | 1296 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Mepo5g03734 | 1296 | MobiDBLite | consensus disorder prediction | 344 | 363 | - | - | |
Mepo5g03734 | 1296 | Pfam | Sin3 family co-repressor | 383 | 474 | IPR013194 | - | |
Mepo5g03734 | 1296 | SUPERFAMILY | PAH2 domain | 118 | 190 | IPR036600 | GO:0006355 | |
Mepo5g03734 | 1296 | SMART | hdac_interact2seq4b | 381 | 481 | IPR013194 | - | |
Mepo5g03734 | 1296 | Gene3D | Paired amphipathic helix | 43 | 105 | IPR036600 | GO:0006355 | |
Mepo5g03734 | 1296 | MobiDBLite | consensus disorder prediction | 908 | 922 | - | - | |
Mepo5g03734 | 1296 | Pfam | Paired amphipathic helix repeat | 60 | 104 | IPR003822 | GO:0006355 | |
Mepo5g03734 | 1296 | Pfam | Paired amphipathic helix repeat | 274 | 318 | IPR003822 | GO:0006355 | |
Mepo5g03734 | 1296 | Pfam | Paired amphipathic helix repeat | 144 | 188 | IPR003822 | GO:0006355 | |
Mepo5g03734 | 1296 | Pfam | C-terminal domain of Sin3a protein | 1011 | 1258 | IPR031693 | - | |
Mepo5g03734 | 1296 | MobiDBLite | consensus disorder prediction | 777 | 797 | - | - | |
Mepo5g03734 | 1296 | MobiDBLite | consensus disorder prediction | 842 | 963 | - | - | |
Mepo5g03734 | 1296 | FunFam | Paired amphipathic helix SIN3-like protein | 120 | 191 | - | - | |
Mepo5g03734 | 1296 | ProSiteProfiles | PAH domain profile. | 121 | 191 | IPR003822 | GO:0006355 | |
Mepo5g03734 | 1296 | SUPERFAMILY | PAH2 domain | 34 | 106 | IPR036600 | GO:0006355 | |
Mepo5g03734 | 1296 | ProSiteProfiles | PAH domain profile. | 37 | 107 | IPR003822 | GO:0006355 | |
Mepo5g03734 | 1296 | FunFam | Paired amphipathic helix protein SIN3 | 249 | 323 | - | - | |
Mepo5g03734 | 1296 | MobiDBLite | consensus disorder prediction | 1278 | 1296 | - | - | |
Mepo5g03734 | 1296 | Gene3D | Paired amphipathic helix | 120 | 192 | IPR036600 | GO:0006355 | |
Mepo5g03734 | 1296 | MobiDBLite | consensus disorder prediction | 882 | 907 | - | - | |
Mepo5g03734 | 1296 | PANTHER | SIN3B-RELATED | 38 | 1153 | IPR039774 | GO:0003714 | |
Mepo5g03734 | 1296 | MobiDBLite | consensus disorder prediction | 659 | 740 | - | - | |
Mepo5g03734 | 1296 | FunFam | Paired amphipathic helix protein Sin3 | 43 | 105 | - | - | |
Mepo5g03734 | 1296 | Gene3D | Paired amphipathic helix | 249 | 323 | IPR036600 | GO:0006355 | |
Mepo5g03734 | 1296 | MobiDBLite | consensus disorder prediction | 342 | 363 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo5g03734 | Mepo-Chr5 | 46658725 | 46686753 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo5g03734 | 19 | 129 | WRKY Transcription Factor Family | AT4G12020 | 48.214 | 3.31e-19 | 92.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Mepo5g03734 | Sin3a_C | 1.1e-54 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo5g03734 | K11644 | - | gmx:100807181 | 1888.23 |