Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03733 ATGGGTGGTGGTGATCAGAAAAATGTTTCCATTGTTAAGAAGAAAAAGAAAAACGGTTCTTTTAAGTCCATTTTCATGCATGCAGATGTTCTAGATTGGTTTTTCATGGTTTTTGGTTTGATTGGTGCCATTGGTGATGGCATATCAGTTCCTTTGTTGTTGTTTATTGCAGGCAGACTTATGAACTCTATTGGTAGTGCTTCAGGCACATCAAGCAACAATTTTGTCCATAACATCAATAAGAATGCTGTTCTTTTTCTATATTTGGCATGTGCCTCTTTTGTTGCTTGCTTCCTAGAGGGTTATTGTTGGACAAGAACAGGTGAAAGACAAGCTGCAAGAATGAGAGTTAGGTACTTAAAAGCAATTCTAAGACAAGATGTAGCATACTTTGATTTGCATGTTACAAGCACATCAGAAGTCATCACCAGTGTCTCCAATGATAGCCTAGTAATTCAAGATGTTATTAGCGAAAAGGTTCCAAATTTTTTGATGAATGCATCTATGTTCCTTGGAAGCTACATAGCAGCATTTGCATTGTTATGGAGATTGGCAATTGTTGGGTTCCCTTTTTTGGTAGTGCTAGTGATTCCCGGTTTCATGTATGGAAGAATTTCGATGGGATTGGCTAGAAAAATTAGAGAAGAGTACAATAAAGCCGGTACAATAGCAGAACAAGCAATATCTTCAATCAGAACTGTTTATTCCTTTGCAGGAGAAAGCAAAACCATAGCTGCTTTCTCTGATGCTTTGGAAGGATCAGTTAAATTGGGATTGAAACAAGGCTTAGCTAAAGGCTTAGGAATAGGAAGCAATGGTCTTGTTTTTGCTGTATGGTCTTTGATGGCCTATTATGGTAGCAGAATGGTCATGTATCATGGTGCTAGAGGTGGTACCGTTTATTCGGTTGGAATTTCAATAACACTTGGAGGATTGGCTTTCGGAGCTGGTTTATCAAATGTGAAGTACTTCTCGGAAGCAAGTGCAGCAGGAGAAAGAATAATGGAAATGATAAAACAAGTTCCAAAGATTGATTCTGAAAACATGGAAGGTGAAATTCTAGAAAGAGTCTTGGGGGAAGTTGAATTCAAGCATGTTGAATTTGTGTATCCATCAAGACCAGAAAGTGTGATTTTAAATGATTTTTGCTTAAAGGTTCCATCAGGAAAAACAGTGGCATTAGTAGGAGGAAGTGGTTCAGGAAAATCAACAATTGTATCACTTTTGCAAAGATTTTATGATCCAATTGGTGGAGAAATTCTTCTTGATGGAGTTGCTATTCATAAGTTGCAACTTAAGTGGCTTAGGTCTCAAATGGGTTTAGTGAGTCAAGAACCTGCTTTGTTTGCAACAAGCATTAAGGAGAATATACTTTTTGGTAGAGAGGATGCTACATTTGAAGATGTTGTAGATGCTTCTAAAGCTTCCAATGCTCATAATTTCATTTCATTGTTGCCACAAGGATATGATACTCAGGTTGGGGAGAGGGGAGTTCAAATGTCGGGGGGGCAAAAGCAAAGAATTGCAATTGCAAGAGCCATCATAAAAATGCCAAAAATTCTATTGTTAGACGAAGCAACAAGTGCACTCGATTCTGAATCCGAACGAGTCGTCCAAGAAGCTCTAGACAAAGCTGCAGTTGGACGCACCACCATCATCATCGCTCACCGCTTATCTACCATCCAAAAGGCAGACATTATTGTGGTCGTTCAAAATGGTCTGGTCATGGAAACGGGATCTCACGATAGCCTCATGCAAAATGACAATTCTCTTTACACCTCCCTTGTTCGTCTCCAACAAACTATAAATGAACAAAGTGACGACACTCCATCTATCATGAATACAGATCACATGCAAAACAAGAGTAGTCGTAGACTTGTAAGATCTTTGGTGGGTGATAGATTGGCATTAGTAGTACAGACAATTTCAGCGGTGGTAATAGCATTCACAATGGGCCTAATCATTGCATGGAGATTAACCATTGTTATGATAGCAGTTCAACCACTTATCATCTGTTGTTTGTATACAAGGCGTGTCCTTCTTAAGAACATGTCAAGCAAAGCCATCAAGGCTCAAGATCAGTGTAGCAAAATAGCTGCTGAAGCTGTTTCAAATCTAAGAACCATCAATGCTTTTTCATCTCAAGATAGAATTCTCAAAATGCTTGAAAAGGCCCAACAAGGACCAAGTCTTGAAAGTATTAGACAGTCTTGGTTTGCAGGTATTGGGCTTGCATGTTCACAATGTCTCAATTATTCAAGTTGGGCTTTGGACTTTTGGTATGGTGGAAAACTTGTGTCGCAAGGTTATATCTCGGCTAAGGCGTTATTTGAGACTTTTATGATTTTGGTAAGTACAGGAAGAGTTATTGCTGACGCTGGTAGCATGACAAGTGATCTTGCTAAAGGCTCTGATGTCGTTGGATCGGTTTTCGCAATCCTCGATAGGTATACAAAAATCAAGCCCGATGACTTGAGAGGTTACAAACTTGAAAAAATAATAGGAAAAATTGAGCTTTTTGACGTAAATTTTGCATATCCGGCTAGACCTAATATAATGATTTTTCAAGGGTTCTCGATTAAAATTGATGCTGGAAAATCGACAGCTTTGGTAGGGGAAAGTGGTTCTGGAAAATCAACAATCATAGGACTTATTGAGAGATTCTATGATCCACTTAAAGGGATAGTGACAATTGATGGTAGAGACATAAAGACTTATAATCTAAGGTCATTAAGGAAACATGTTGCACTTGTGAGTCAAGAACCAACATTGTTTAGTGGTACCATAAGGGAAAATATTGCATATGGAGCTTACGATGATAAGGTTGATGAGAGTGAAATTATAGAGGCATCAAAGGCCGCAAGTGCTCATGATTTTATATCAAGCTTAAAAGATGGTTATGATACATTGTGTGGTGATAGAGGAGTTCAACTTAGTGGTGGTCAAAAGCAGAGAATTGCAATAGCTAGAGCTATATTGAAGAATCCAGAGGTGTTGCTTTTGGATGAAGCAACAAGTGCACTTGATAGTCAATCTGAGAAATTAGTCCAAAATGCTTTAGAAAGGGTTATGGTTGGAAGGACAAGTGTGGTTGTGGCACATAGGTTGAGTACTATACAAAACTGTGATTTGATTGCTGTTTTGGATAAGGGCATTGTTGTTGAGAAAGGAACACATTCATCTTTGTTGTCAAAAGGGTCAAGTGGAGCTTATTACTCTTTGGTTGGATACGAATTAGCTACCAAAATTGGCCACGAAGTAACATTTTTGCCCAGAATCAGATAA 3285 0.3857 MGGGDQKNVSIVKKKKKNGSFKSIFMHADVLDWFFMVFGLIGAIGDGISVPLLLFIAGRLMNSIGSASGTSSNNFVHNINKNAVLFLYLACASFVACFLEGYCWTRTGERQAARMRVRYLKAILRQDVAYFDLHVTSTSEVITSVSNDSLVIQDVISEKVPNFLMNASMFLGSYIAAFALLWRLAIVGFPFLVVLVIPGFMYGRISMGLARKIREEYNKAGTIAEQAISSIRTVYSFAGESKTIAAFSDALEGSVKLGLKQGLAKGLGIGSNGLVFAVWSLMAYYGSRMVMYHGARGGTVYSVGISITLGGLAFGAGLSNVKYFSEASAAGERIMEMIKQVPKIDSENMEGEILERVLGEVEFKHVEFVYPSRPESVILNDFCLKVPSGKTVALVGGSGSGKSTIVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLVSQEPALFATSIKENILFGREDATFEDVVDASKASNAHNFISLLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKMPKILLLDEATSALDSESERVVQEALDKAAVGRTTIIIAHRLSTIQKADIIVVVQNGLVMETGSHDSLMQNDNSLYTSLVRLQQTINEQSDDTPSIMNTDHMQNKSSRRLVRSLVGDRLALVVQTISAVVIAFTMGLIIAWRLTIVMIAVQPLIICCLYTRRVLLKNMSSKAIKAQDQCSKIAAEAVSNLRTINAFSSQDRILKMLEKAQQGPSLESIRQSWFAGIGLACSQCLNYSSWALDFWYGGKLVSQGYISAKALFETFMILVSTGRVIADAGSMTSDLAKGSDVVGSVFAILDRYTKIKPDDLRGYKLEKIIGKIELFDVNFAYPARPNIMIFQGFSIKIDAGKSTALVGESGSGKSTIIGLIERFYDPLKGIVTIDGRDIKTYNLRSLRKHVALVSQEPTLFSGTIRENIAYGAYDDKVDESEIIEASKAASAHDFISSLKDGYDTLCGDRGVQLSGGQKQRIAIARAILKNPEVLLLDEATSALDSQSEKLVQNALERVMVGRTSVVVAHRLSTIQNCDLIAVLDKGIVVEKGTHSSLLSKGSSGAYYSLVGYELATKIGHEVTFLPRIR 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03733 1094 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 627 802 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03733 1094 CDD ABC_MTABC3_MDL1_MDL2 361 599 - -
Mepo5g03733 1094 PANTHER ABC TRANSPORTER B FAMILY 13 598 IPR039421 -
Mepo5g03733 1094 Pfam ABC transporter 856 1006 IPR003439 GO:0005524
Mepo5g03733 1094 Pfam ABC transporter 379 528 IPR003439 GO:0005524
Mepo5g03733 1094 FunFam ABC transporter B family member 4 827 1082 - -
Mepo5g03733 1094 Gene3D ABC transporter type 1, transmembrane domain 625 834 IPR036640 GO:0005524|GO:0016020
Mepo5g03733 1094 CDD ABC_6TM_Pgp_ABCB1_D2_like 625 820 - -
Mepo5g03733 1094 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 37 326 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03733 1094 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 830 1076 IPR027417 -
Mepo5g03733 1094 FunFam ABC transporter B family member 1 23 357 - -
Mepo5g03733 1094 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 599 IPR027417 -
Mepo5g03733 1094 SUPERFAMILY ABC transporter transmembrane region 626 815 IPR036640 GO:0005524|GO:0016020
Mepo5g03733 1094 Gene3D - 351 600 IPR027417 -
Mepo5g03733 1094 ProSitePatterns ABC transporters family signature. 500 514 IPR017871 GO:0005524|GO:0016887
Mepo5g03733 1094 CDD ABC_6TM_Pgp_ABCB1_D1_like 36 334 - -
Mepo5g03733 1094 CDD ABC_MTABC3_MDL1_MDL2 837 1059 - -
Mepo5g03733 1094 Gene3D - 835 1075 IPR027417 -
Mepo5g03733 1094 FunFam ABC transporter B family member 4 351 607 - -
Mepo5g03733 1094 Gene3D ABC transporter type 1, transmembrane domain 24 617 IPR036640 GO:0005524|GO:0016020
Mepo5g03733 1094 SMART AAA_5 864 1058 IPR003593 GO:0016887
Mepo5g03733 1094 SMART AAA_5 388 574 IPR003593 GO:0016887
Mepo5g03733 1094 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 361 597 IPR003439 GO:0005524
Mepo5g03733 1094 Pfam ABC transporter transmembrane region 626 784 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03733 1094 Pfam ABC transporter transmembrane region 37 306 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03733 1094 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 837 1075 IPR003439 GO:0005524
Mepo5g03733 1094 ProSitePatterns ABC transporters family signature. 978 992 IPR017871 GO:0005524|GO:0016887
Mepo5g03733 1094 SUPERFAMILY ABC transporter transmembrane region 32 345 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03733 Mepo-Chr5 46646131 46653672 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03733 5 605 Calmodulin-binding Proteins AT2G36910 34.934 2.37e-108 366