Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03732 ATGGGTGGTGGTGATGAGAAAAATGTTTCCATTAATGTTAAGAAAAAGAAGAATGGTTCTTTTAAGTCCATTTTCATGCATGCTGATGTTCTTGATTGTTTTTTCATGGTTTTTGGTTTGATTGGTGGCATTGGTGATGGACTAATAACCCCTTTGCTTCTGTTTTTCTTGAGCAGAATTATGAACTCTATTGGTGCTATTTCTGGCCAATCAAAGAGCAATTTTGTCCATAGCATCAATGAGAATGCTATTGTTTTGTTATATTTGGCATGTGCCTCTTCTGTTGCTTGCTTCCTAGAGGGTTATTGTTGGACAAGAACAGGTGAAAGACAAGCTGCAAGAATGAGAGTTAGGTACTTAAAAGCAGTTCTAAGGCAAGAAATAGCATACTTTGATTTGCATGTTACAAGCACATCAGAAGTCATCACAAGTGTCTCTAACGACATCCTAGTAATTCAAGATGTTCTTAGTGAAAAGGTTCCGGATTTTTTGATGAATATATCTAATTTCATTGGAGGATACATAGTGGCATTTGCATTGTTATGGAGATTAGCAATTGTTGGGTTCCCTTTTGTAGTACTACTTGTGATTCCTGGTTTCATGTATGGGAGAGTTTCGATGGGATTGGCTAGAAAAATTAGAGAAGAGTATAATCAAGCTGGTACAATAGCAGAAAAAGCAATATCTTCAATCAGAACTGTTTATTCCTTTGTAGGAGAAAGCAAAACCATAGATGCTTTCTCTGAAGCTTTGGAAGGATCAGTGAAGTTGGGATTGAAACAAGGCTTAGCTAAAGGCTTAGGCATAGGAAGCAATGGTGTTGCTTTTGCTATATGGTCTTTTATGGCATATTATGGTAGCAGAATGGTTATGTATCATGGTGCTAAAGGTGGTACCGTTTATTCAGTTGGATTTTCGTTAGCAATTGGTGGATCGGCTTTAGGATCTGCTATGTCAAATGTGAAGTACTTCTCAGAAGCAAGTGCAGCAGGCGAAAGAATAATGGAAGTGATAAAAAGAGTTCCAAATATTGATTCTGAAAATATGGAAGGTGAAATTCTAGAGAAAGTGTCGGGGGAAGTTGAATTCAACCATGTTGAATTTGGGTATCCATCAAGACCAGAAAGTGTGATCTTAAATGATCTTTGTTTAAAGATTCCATCTGGAAAAACAGTGGCATTAGTAGGAGGAAGTGGTTCAGGAAAATCAACAGTTGTATCACTTTTACAAAGATTTTATGATCCAAAAGGTGGAGAGATACTTCTTGATGGAGTTGCTATTCATAAGTTACAACTTAAGTGGCTTAGGTCTCAAATGGGTTTAGTGAGTCAAGAACCTGCTTTGTTTGCAACAAGTATAAAGGAGAATATACTTTTTGGAAGTGAGGATGCTACATTTGAAGATGTTGTGGATGCTGCTAAAGCTTCTAATGCTCATAATTTCATTTCAATGTTGCCACAAGGATATGATACTCAGGTTGGGGAGAGAGGAGTTCAAATGTCAGGGGGACAAAAACAAAGGATTGCCATTGCAAGAGCTATAATAAAAATGCCAAAAATTCTATTGCTAGATGAAGCAACAAGTGCACTCGATTCGGAATCCGAAAGAGTTGTCCAAGAAGCTCTAGACAAAGCCACAGTTGGACGCACCACCATAATCATTGCTCACCGCCTATCCACCATCCAAAATGCAGACATCATTGCAGTTGTTCAAAATGGTAAGATTGTGGAAACAGGATCTCACGAAAGCCTAGTGCAAGATGAAAATTCTCTTTATGCCTCCCTTGTTTATCTTCAACAAACAAAAAAGGACCAAACAGACGACACCCCATCTATCATGAATAAAGATCACATGCAAAACACGAGTACTTGTAGACTCGTGAGTCCTTCTAGCTCTTTTAACTCAACAACGCGAGGCAGTGATGATGTTTTTAACTATAACAATGTCGTTGAAGATGTTGTTACTAAATTTGTAGTTGATGATGATGATAAGGATAATAGTAAAAACGAGAAGAAGGTTGAGGTTCCTTCCTTTCAAAGGTTGTTGGCAATGAATGGACCAGAGTGGAAGCAAACGTGCTTGGGTTGTATAAATGCGGTTTTATTCGGTGCAATTCAACCTGTGTATTCTTTTGGATTGGGGTCGGTTATATCGGTTTATTTTTTGGAGGACCATGATGAGATCAAGAAGCAAATTAGGATTTATGCACTTTGTTTTCTAGGGTTGGCTGCTATCTCAATGGTTGTTAATGTGCTTCAACATTATAGCTTTGCTTACATGGGAGAGTACTTGACTAAGAGGGTTAGAGAAAAAATGTTTTCGAAGATACTCACTTTTGAAGTTGGTTGGTTTGATGAAGATCAAAATTCTACAGGTTCTGTCTGCTCTAGACTTGCCAAAGAAGCCAATGTGGTAAGATCTTTGGTGGGTGATAGATTGGCTCTAGTGGTACAAACAATTTCAGCAGTAGTAATAGCATTCACAATGGGACTAATCATTGCATGGAGACTAGCCATTGTTATGATAGCAGTTCAACCAGTTATCATATGTTGTTTTTATACAAGGTGTGTTCTTCTTAAGAACATGTCAAGCAATGCCATCAAGGCCCAAGATGAATGTAGCAAAATAGCTGCTGAAGCTGTTTCAAATCTAAGAACCATCAATGCTTTTTCATCTCAAGAGAGAATTCTCAAAATGCTTGAAAAATCCCAACAAGGCCCAAGTCATGAAAGTATTAGACAATCTTGGTTTGCTGGCATTGGACTTGCATGTGCACAAAGCATCAAATTATGTAGTTATTCTTTGACCTTTTGGTATGGTGGGAAACTTGTGTCGCAAGGTTATATCTCAGCTAAGGCGTTTTTTAAGACTTTTATAATTTTGGTAACTACCGGAAAAGTTATTGCTGATGCTGGTAGCATGACGAATGATCTTGCTAAAGGTTCTGATGCCATTGAGTCGGTTTTCACAATCCTTGATAGGTATACGAAAATCGAGCCTGATGAAATAGAAGGTTACAAAGCAAAAAAGTTAATTGGAAAAATTGAATTTTGTGATGTATATTTTGCATATCCGTCTAGACCAAATGTGATGATTTTTGAAGGATTCTCGATTAAAATTGATGCTGGAAAATCGATAGCTTTGATAGGGGAAAGTGGTTCGGGGAAATCAACGATCATAGGACTAATTGAGAGGTTCTATGATCCACTTGAAGGGATAGTGACAATTGATGGTAGGGACATAAAAACTTATAATCTAAGGTCACTGAGGAAACACATTGCACTTGTGAGTCAAGAACCAACATTGTTTAGTGGTACCATAAAAGAAAATATTGCATATGGACCATATGATGATAAGGTGGATGAAAGTGAAATTATAGAGGCATCAAAGGCTGCAAATGCTCATGATTTCATATCAAGCTTAAAAGATGGTTATGATACACTGTGTGGTGATAGAGGAGTTCAACTTAGTGGTGGTCAAAAACAAAGAATTGCAATAGCTAGAGCTATATTAAAGAATCCAGACATGTTGCTTTTGGATGAAGCAACAAGTGCACTTGATAGTCAATCAGAGAAATTAGTCCAAGATACTTTAGAAAGGGTCATGGTTGGAAGGACAAGCGTGGTTGTAGCACATAGGTTGAGTACTATACAAAACTGTGATTTGATTGCTGTTTTGGATAAGGGAAGTGTTGTTGAGAAAGGAACACATTCATCTTTGCTGTCTAAAGGGCCAAGTGGAGCATATTACTCTTTGATAAGCCTACAAAGAAGACCAACGAACATAATTGTTGATTCTTCACATGAAATCAACTAA 3816 0.3755 MGGGDEKNVSINVKKKKNGSFKSIFMHADVLDCFFMVFGLIGGIGDGLITPLLLFFLSRIMNSIGAISGQSKSNFVHSINENAIVLLYLACASSVACFLEGYCWTRTGERQAARMRVRYLKAVLRQEIAYFDLHVTSTSEVITSVSNDILVIQDVLSEKVPDFLMNISNFIGGYIVAFALLWRLAIVGFPFVVLLVIPGFMYGRVSMGLARKIREEYNQAGTIAEKAISSIRTVYSFVGESKTIDAFSEALEGSVKLGLKQGLAKGLGIGSNGVAFAIWSFMAYYGSRMVMYHGAKGGTVYSVGFSLAIGGSALGSAMSNVKYFSEASAAGERIMEVIKRVPNIDSENMEGEILEKVSGEVEFNHVEFGYPSRPESVILNDLCLKIPSGKTVALVGGSGSGKSTVVSLLQRFYDPKGGEILLDGVAIHKLQLKWLRSQMGLVSQEPALFATSIKENILFGSEDATFEDVVDAAKASNAHNFISMLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKMPKILLLDEATSALDSESERVVQEALDKATVGRTTIIIAHRLSTIQNADIIAVVQNGKIVETGSHESLVQDENSLYASLVYLQQTKKDQTDDTPSIMNKDHMQNTSTCRLVSPSSSFNSTTRGSDDVFNYNNVVEDVVTKFVVDDDDKDNSKNEKKVEVPSFQRLLAMNGPEWKQTCLGCINAVLFGAIQPVYSFGLGSVISVYFLEDHDEIKKQIRIYALCFLGLAAISMVVNVLQHYSFAYMGEYLTKRVREKMFSKILTFEVGWFDEDQNSTGSVCSRLAKEANVVRSLVGDRLALVVQTISAVVIAFTMGLIIAWRLAIVMIAVQPVIICCFYTRCVLLKNMSSNAIKAQDECSKIAAEAVSNLRTINAFSSQERILKMLEKSQQGPSHESIRQSWFAGIGLACAQSIKLCSYSLTFWYGGKLVSQGYISAKAFFKTFIILVTTGKVIADAGSMTNDLAKGSDAIESVFTILDRYTKIEPDEIEGYKAKKLIGKIEFCDVYFAYPSRPNVMIFEGFSIKIDAGKSIALIGESGSGKSTIIGLIERFYDPLEGIVTIDGRDIKTYNLRSLRKHIALVSQEPTLFSGTIKENIAYGPYDDKVDESEIIEASKAANAHDFISSLKDGYDTLCGDRGVQLSGGQKQRIAIARAILKNPDMLLLDEATSALDSQSEKLVQDTLERVMVGRTSVVVAHRLSTIQNCDLIAVLDKGSVVEKGTHSSLLSKGPSGAYYSLISLQRRPTNIIVDSSHEIN 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03732 1271 CDD ABC_MTABC3_MDL1_MDL2 361 599 - -
Mepo5g03732 1271 Gene3D ABC transporter type 1, transmembrane domain 668 994 IPR036640 GO:0005524|GO:0016020
Mepo5g03732 1271 FunFam ABC transporter B family member 4 1005 1261 - -
Mepo5g03732 1271 Pfam ABC transporter transmembrane region 693 963 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03732 1271 Pfam ABC transporter transmembrane region 37 307 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03732 1271 SMART AAA_5 388 580 IPR003593 GO:0016887
Mepo5g03732 1271 SMART AAA_5 1042 1236 IPR003593 GO:0016887
Mepo5g03732 1271 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 699 980 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03732 1271 FunFam Putative ABC transporter B family member 8 658 1003 - -
Mepo5g03732 1271 CDD ABC_6TM_Pgp_ABCB1_D1_like 50 334 - -
Mepo5g03732 1271 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1015 1253 IPR003439 GO:0005524
Mepo5g03732 1271 CDD ABC_6TM_Pgp_ABCB1_D2_like 682 998 - -
Mepo5g03732 1271 FunFam ABC transporter B family member 1 23 360 - -
Mepo5g03732 1271 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 361 597 IPR003439 GO:0005524
Mepo5g03732 1271 Gene3D - 351 600 IPR027417 -
Mepo5g03732 1271 PANTHER ABC TRANSPORTER B FAMILY 9 751 IPR039421 -
Mepo5g03732 1271 Pfam ABC transporter 379 528 IPR003439 GO:0005524
Mepo5g03732 1271 ProSitePatterns ABC transporters family signature. 500 514 IPR017871 GO:0005524|GO:0016887
Mepo5g03732 1271 Gene3D ABC transporter type 1, transmembrane domain 24 621 IPR036640 GO:0005524|GO:0016020
Mepo5g03732 1271 FunFam ABC transporter B family member 4 351 606 - -
Mepo5g03732 1271 CDD ABC_MTABC3_MDL1_MDL2 1015 1256 - -
Mepo5g03732 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1010 1256 IPR027417 -
Mepo5g03732 1271 SUPERFAMILY ABC transporter transmembrane region 34 342 IPR036640 GO:0005524|GO:0016020
Mepo5g03732 1271 ProSitePatterns ABC transporters family signature. 1156 1170 IPR017871 GO:0005524|GO:0016887
Mepo5g03732 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 599 IPR027417 -
Mepo5g03732 1271 Gene3D - 1005 1262 IPR027417 -
Mepo5g03732 1271 Pfam ABC transporter 1035 1184 IPR003439 GO:0005524
Mepo5g03732 1271 SUPERFAMILY ABC transporter transmembrane region 680 997 IPR036640 GO:0005524|GO:0016020
Mepo5g03732 1271 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 37 326 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03732 Mepo-Chr5 46625152 46638050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03732 2 1257 Calmodulin-binding Proteins AT2G36910 43.574 0.0 1051
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03732 K05658 - gmx:100807709 1902.87