Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03731 ATGGGTGGTGGTGATGAGAAAAATGTTTCCATTAAGAAGAATGGTTCTTTTAAGTCCATTTTCATGCATGCTGATGTTCTTGATTGTTTTTTCATGGTTTTTGGTTTGATTGGGGCCATTGGTGATGGAATAATGACCCCTTTGCTTCTGTTTTTCTTAAGCAGAATTATGAACTCTATTGGTTCTATTTCTGGTCCATCAAAGAACAATTTTGTCCATAACATCAATGAGAATGCTATTGTTTTGTTATATTTGGCATGTGCCTCTTCCGTTGTTTGCTTCCTAGAGGGTTATTGTTGGACAAGAACAGGTGAAAGACAAGCTGCAAGAATGAGAGTTAGGTACTTAAAAGCAGTTCTAAGACAAGAAGTAGAATACTTTGATTTGCATGTTACAAGCACATCAGAAGTCATCACAAATGTCTCTAACGACATCCTATTAATTCAAGATGTTCTTAGTGAAAAGGTTCCAAATTTTGTGATGAATACATCTATTTTCATTGGAGGATACATAGTGGCATTTGCATTGTTATGGAGATTGGCAATTGTTGGGTTCCCTTTTGTAGTACTACTTGTGATTCCTGGTTTCATGTATGGAAGAACTTTGATGGGGCTGGCTAGAAAAATGAGAGAAGAGTACAATCAAGCTGGTAATATAGCAGAAAAAGCAATATCTTCAATCAGAACTGTTTATTCCTTTGCAGGAGAAAGCAAAACCATAGCTGCTTTCTCTAAAGCTTTGGAAGGATCAGTGAAGTTGGGATTGAAACAAGGTTTGGCTAAAGGCTTAGCCATAGGAAGCAGTGGTGTTGTTTTTGCTATATGGTCTTTTATATCATATTATGGTAGCAGAATGGTCATGTATCATGGTGCTAAAGGTGGTACCGTTTATACAGTTGGAGCTTCATTAGCAATTGGTGGATCGGCTTTAGGCGCTGGTATATCCAATGTGAAGTACTTTTCAGAAGCATGTGCAGCAGGAGAAAGAATAATGGAAGTGATAAAAAGAGTTCCAAAGATAGATTCTGAAAACATGGACGGTGAAATTATAGAGAAAGTCTTGGGGGAAGTTGAGTTCAACCATGTTGAATTTGTGTATCCATCAAGACCAGAAAGTGTGGTCCTAAATGATTTTTGTTTAAAGGTTCCATCAGGAAAAACAGTGGCATTAGTAGGAGGAAGTGGTTCAGGAAAATCAACAGTTGTATCACTTTTGCAAAGATTTTATGATCCAATTGGTGGAGAGATTCTTCTTGATGGAGTTGCTATTCATAAGTTGCAACTTAAGTGGCTTAGGTCTCAAATGGGTTTAGTGAGTCAAGAACCTGCTTTGTTTGCAACAAGCATTAAGGAGAATATACTTTTTGGTAGAGAAGATGCTACATATGAAGAAATTGTGGATGCTGCTGAAGCTTCCAATGCTCATAATTTCATTTCAATGTTGCCACAAGGATACGAAACTCAGGTTGGGGAGAGAGGAGTTCAAATGTCAGGGGAACAAAAACAAAGGATTGCCATTGCAAGAGCTATAATAAAAATGCCAAAAATTCTATTGCTAGATGAAGCAACAAGTGCACTCGATTCTGAATCCGAAAGAGTTGTTCAAGAAGCTTTAGACAAAGCCACTGTTGGACGCACCACCATCATCATCGCTCACCGCTTATCCACCATCCAAAATGCAGACATCATTGCGGTTATTCAAAAAGGTGTGATCATGGAAACGGGATCTCATGAAAGCCTCATGCAAAATGACAATTCTCTTTACGCCTCCCTTGTTCGTCTCCAGCAAACAAAAAAGGACCAAATCGATGACACCCCATCTATCATGCATAAAGATCACATGCAAAACACGAGTAATTGTAGACTCGCGAGACCTTGTAGCTCTTTCAACTCAATAACGCGAGGCAATGATGATGTTTTTAATTATAACAATGTTGTTGAAGATGTTGTTACTACATTTGTAGTTGATGATGATGTTTTTAAAAACAAGAAGTTTGAGGTTCCTTCCTTTCAAAGGTTGTTGGCAATGAATGGACCAGAGTGGAAGCAAACATGTTTGGGTTGTATAAATGCGGTTTTATTCGGTGCAATTCAACCTGTGTATTCATTTGGAATGGGGTCAGTTATATCGGTTTATTTTTTGGAAGACCATGATGAGATCAAGAAGCAAATTAGGATTTATGAACTTTGTTTTCTAGGGTTGGCTGTTATCTCAATGGTTGTTAATGTGCTTCATCATTTAGCTTTGATTACATAG 2256 0.3785 MGGGDEKNVSIKKNGSFKSIFMHADVLDCFFMVFGLIGAIGDGIMTPLLLFFLSRIMNSIGSISGPSKNNFVHNINENAIVLLYLACASSVVCFLEGYCWTRTGERQAARMRVRYLKAVLRQEVEYFDLHVTSTSEVITNVSNDILLIQDVLSEKVPNFVMNTSIFIGGYIVAFALLWRLAIVGFPFVVLLVIPGFMYGRTLMGLARKMREEYNQAGNIAEKAISSIRTVYSFAGESKTIAAFSKALEGSVKLGLKQGLAKGLAIGSSGVVFAIWSFISYYGSRMVMYHGAKGGTVYTVGASLAIGGSALGAGISNVKYFSEACAAGERIMEVIKRVPKIDSENMDGEIIEKVLGEVEFNHVEFVYPSRPESVVLNDFCLKVPSGKTVALVGGSGSGKSTVVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLVSQEPALFATSIKENILFGREDATYEEIVDAAEASNAHNFISMLPQGYETQVGERGVQMSGEQKQRIAIARAIIKMPKILLLDEATSALDSESERVVQEALDKATVGRTTIIIAHRLSTIQNADIIAVIQKGVIMETGSHESLMQNDNSLYASLVRLQQTKKDQIDDTPSIMHKDHMQNTSNCRLARPCSSFNSITRGNDDVFNYNNVVEDVVTTFVVDDDVFKNKKFEVPSFQRLLAMNGPEWKQTCLGCINAVLFGAIQPVYSFGMGSVISVYFLEDHDEIKKQIRIYELCFLGLAVISMVVNVLHHLALIT 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03731 751 Pfam ABC transporter transmembrane region 33 299 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03731 751 CDD ABC_MTABC3_MDL1_MDL2 357 595 - -
Mepo5g03731 751 Gene3D - 347 596 IPR027417 -
Mepo5g03731 751 CDD ABC_6TM_Pgp_ABCB1_D1_like 32 330 - -
Mepo5g03731 751 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 33 322 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03731 751 FunFam ABC transporter B family member 4 347 602 - -
Mepo5g03731 751 FunFam ABC transporter B family member 1 19 354 - -
Mepo5g03731 751 SUPERFAMILY ABC transporter transmembrane region 30 341 IPR036640 GO:0005524|GO:0016020
Mepo5g03731 751 Gene3D ABC transporter type 1, transmembrane domain 656 751 IPR036640 GO:0005524|GO:0016020
Mepo5g03731 751 SMART AAA_5 384 576 IPR003593 GO:0016887
Mepo5g03731 751 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 595 IPR027417 -
Mepo5g03731 751 PANTHER ABC TRANSPORTER B FAMILY 5 743 IPR039421 -
Mepo5g03731 751 Gene3D ABC transporter type 1, transmembrane domain 20 604 IPR036640 GO:0005524|GO:0016020
Mepo5g03731 751 Pfam ABC transporter 375 524 IPR003439 GO:0005524
Mepo5g03731 751 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 357 593 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03731 Mepo-Chr5 46594331 46600823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03731 16 746 Calmodulin-binding Proteins AT2G36910 43.525 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03731 K05658 - gmx:100807709 1073.15