Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03730 ATGGGCCTAATTATTGCATGGAGATTAGCCATTGTTATAATAGCAGATCAACCAATTATCATATGTTGTTTCTACACAAGGCGTGTCCTTCTTAAGAATATGTCAAGAAAAGCAATCAAGGCCCAAGTTAAATGTAGCAAAATAGCTGATGAAGCTATTTCAAATCTAAGAATCATCAATGCTTTTTCATCTCAAGACATGATTCTTAAAATGCTTGAAAAAGCCCAGCAAGGCCCAAGTCAGGAAAGTATTAGACAATCTTGGTTTGCTGGCATTGGGCTTGCATGTTCACAAAGTATCAAATTTTGTACTTATGCTTTGAGCTTTTGGTATGGTGGGAAACTTGTGTCGCAAGGTTATATATCGGCTAAGGAGTTATTTAAAACTTTTATAATTTTGGTAAGTACCGGAAAAGTTATTGCTGATGCTGGTAGCATGACAAACGATCTTGTTAAAGGTTCTGATACCATTGGATCGGTTTTCACAATCCTTGATAGGTATACGAAAATCGAGCCCGATGAAATAGAAGGTTACAAAGCTGAAAAGTTAATAGGAAAAATCGAACTTTGTGATGTATATTTTGCATATCCGGCTAGACCTAATGTGATGATTTTTCAAGGATTCTCGATTAAAATTGATGGCGAAAAATCAACGGCTTTGGTAGAGGGAAGTGGTTCTGGAAAATCGACGATCATAGGGCTAATTGAGAGGTTCTATGATCCTCTTGAAGGGATCGTGACAATTGATGGCAGAGACATAAAGACTTATAATCTAAGGTCATTAAGGAAACACATTGCACTTGTGAGTCAAGAACCAACATTGTTTGGTGGTACCATAAAAGAAAATATTGCATATGGAGCATATGCTGATAAGGTTGATGAGAGTCAAATTATAGAGGCATCAAAGGCTGCAAATGCTCATGATTTCATATCAAGCTTAAAAGATGGTTATGATACACTGTGTGGTGATAAAGGAGTTCAACTTAGTGGTGGTCAAAAGTAA 1002 0.3663 MGLIIAWRLAIVIIADQPIIICCFYTRRVLLKNMSRKAIKAQVKCSKIADEAISNLRIINAFSSQDMILKMLEKAQQGPSQESIRQSWFAGIGLACSQSIKFCTYALSFWYGGKLVSQGYISAKELFKTFIILVSTGKVIADAGSMTNDLVKGSDTIGSVFTILDRYTKIEPDEIEGYKAEKLIGKIELCDVYFAYPARPNVMIFQGFSIKIDGEKSTALVEGSGSGKSTIIGLIERFYDPLEGIVTIDGRDIKTYNLRSLRKHIALVSQEPTLFGGTIKENIAYGAYADKVDESQIIEASKAANAHDFISSLKDGYDTLCGDKGVQLSGGQK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03730 333 SUPERFAMILY ABC transporter transmembrane region 3 169 IPR036640 GO:0005524|GO:0016020
Mepo5g03730 333 Gene3D - 177 333 IPR027417 -
Mepo5g03730 333 Pfam ABC transporter 207 333 IPR003439 GO:0005524
Mepo5g03730 333 Gene3D ABC transporter type 1, transmembrane domain 2 154 IPR036640 GO:0005524|GO:0016020
Mepo5g03730 333 Gene3D ABC transporter type 1, transmembrane domain 158 176 IPR036640 GO:0005524|GO:0016020
Mepo5g03730 333 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 333 IPR039421 -
Mepo5g03730 333 Pfam ABC transporter transmembrane region 1 135 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03730 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 333 IPR027417 -
Mepo5g03730 333 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 152 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03730 Mepo-Chr5 46591748 46592749 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03730 2 333 Calmodulin-binding Proteins AT2G36910 39.940 4.87e-77 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03730 K05658 - gmx:100807709 530.791