Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03729 ATGGGTGGTGGTGATCAGAAAAATGTTTCCATTAATGTTAAGAAAAAGAAGAATGGTTCTTTTACGTCCATTTTCATGCATGCTGATGTTCTTGATTGTTTTTTCATGGTTTTTGGTTTGATTGGTGCCATTGGTGATGGACTAATGACCCCTTTGCTTCTGCTTTTCTTAAGCAGACTTATGAACTCTATTGGTTCTATTTCTGGCCCATCAAAGAACAATTTTGTCCATAGCATCAATGAGAATGCTGTTGTTTTGTTATATTTGGCATGTGCCTCTTCTGTTGCTTGCTTCCTAGAGGGTTATTGTTGGACAAGAACAGGTGAAAGACAAGCTGCAAGAATGAGAGTTATGTACTTAAAAGCAGTTTTAAGACAAGAAGTAGCATACTTTGATTTGCATGTTACAAGCACATCAGAAGTCATCACAAGTGTCTCTAACGACATCCTAGTAATTCAAGATGTTCTTAGTGAAAAGGTTCCGAATTTTGTGATGAATACATCTATTTTCTTTGGAGGATACATAGTGGCATTTGCATTGTTATGGAGATTGGCAATTATTGGGTTCCCTTTTGTGGTACTACTTGTGATTCCTGGTTTCATGTATGGAAGAACTATGATGGGGTTGGCTAGAAAAATGAGAGAAGAGTACAATAAAGCCGGTACAATAGCAGAACAAGCAATATCTTCAATCAGAACTGTTTATTCCTTTGCAGGAGAAAGCAAAACCATAGCTGCTTTCTCTAATGCTTTGGAAGGATCAGTGAAATTGGGATTGAAACAAGGCTTAGCTAAAGGCTTAGGCATAGGAAGCAATGGTCTTATTTTTGCTGTATGGTCTTTGATGTCCTATTATGGTAGTAGAATGGTCATGTATCATGGTACTAAAGGTGGTACTGTATTTGCTGTTGGATATTCAATAGCACTTGGTGGATCGGCTTTAGGAGCTGGTCTATCAAATGTAAAGTACTTCTCAGAAGCAAGTGTTGCAGGAGAAAGAATAATGGAAATGATAAAAAGAGTTCCAAAAATAGATTCTAAAAACATGGAAGGTGAAATTCTAGAGAAAGTGTTAGGGGAAGTTGAATTCAACCATGTTGAATTTGTGTATCCATCAAGACAAGAAAGTGTGGTTCTAAATGATTTTTGTTTAAAGGTTCCATCAGGAAAAACAGTTGCATTAGTAGGTGGAAGTGGTTCAGGAAAATCAACAATTGTTTCACTTTTGCAAAGATTTTATGATCCAATTGGTGGAGAGATTCTTCTTGATGGAGTTGCTATTCATAAGTTGCAACTTAAGTGGCTTAGGTCTCAAATGGGTTTAGTGAGTCAAGAACCTGCTTTGTTTGCAACAAGCATTAAGGAGAATATACTTTTTGGTAGGGAAGATGCTACATATGAAGATGTTGTAGATGCTGCTAAAGCTTCTAATGCTCATAATTTCATTTCAATGTTGCCACAAGGATATGATACCCAGGTTGGGGAGAGAGGAGTTCAAATGTCAGGGGGACAAAAACAAAGGATTGCCATTGCAAGAGCTATAATAAAAATGCCAAAAATTCTATTGCTAGATGAAGCAACAAGTGCACTCGATTCTGAATCCGAAAGAGTTGTTCAAGAAGCTTTAGACAAAGCCACTGTTGGACGCACCACCATCATCATCGCTCACCGCTTATCCACCATCCAAAATGCAGACATCATTGCGGTTATTCAAAAAGGTGTGATCATGGAAACGGGATCTCATGAAAGCCTCATGCAAAATGACAATTCTCTTTACGCCTCCCTTGTTCGTCTCCAGCAAACAAAAAAGGACCAAATCGATGACACCCCATCTATCATGCATAAAGATCACATGCAAAACACGAGTAGTTGTAGACTCGTGAGTCCATCTAGCTCTTTCAACTCAACAATACAAGGCAGTGATGATGTTTTTAATTATAAAAATGTCGTTGAAGATGTTGTTACTAAATTTGTAGTTGATGATGATAATAATGATAATAGTAAAAACAAGAAGTTTGAGGTTCCTTCCTTTCAAAGGTTGTTGGCAATGAATGGACCAGAGTGGAAGCAAACGTGTTTGGGTTGTATAAATGCGGTTTTATTCGGTGCAATTCAACCTGTGTTTTCATTTGGATTGGGGTCGGTTATATCGGTTTATTTTTTGGAAGACCATGATGAGATCAAGAAGCAAATTAGGATTTATGCACTTTGTTTTCTAGGGTTGGCTGTTACCTCAATGGTTGTTAATGTGCTTCAACATTATAGCTTTGCTTACATGGGAGAGTATCTAACTAAGAGGGTTAGAGAAAGAATGTTTTCCAAGATACTCACATTTGAAGTTGGTTGGTTTGATGAGGATCAAAATTCTACAGGTTCTGTTTGCTCTAGACTTGCCAAAGAAGCCAATGTGGTAAGATCTTTGGTGGGTGATAGATTGTCTCTGGTGATACAAACAATTTCAGCAGTTGTAATAGCATTCACAATGGGCCTACTTATTGCATGGAAATTAGCCATTGTTATGATAGCAGTTCAACCAATTATCATATATTGTTTCTACACGAGGTTTGTTCTTCTTAAGAATATGTCAAACAAAGCTGTCAAGGCCCAAGATGAATGTAGCAAAATAGCTGCTGAAGTTGTTTCAAATCTAAGAACCATCAATGCTTTTTCATCCCAAGACATAATTCTCAAAATGCTTGAAAAAACCCAACAAGGCCCAAGTCGTGAAAGTATAAGACAATCTTGGTTTGCTGGCATTGGACTTGCATGTGCACAAAGTATTAAATTATGTAGTTATGCTTTGAGCTTTTGGTATGGTGGGAGACTTGTGTTGCAAGGTTATATCTCAGCTAAGGCGTTATTTAAGACTTTTTTAATTTTGGTAAGTACCGGAAAAGTTATCGCTGATGCTGGTAGCATGACGAATGATCTTGCTAAAGGTTCCGATGCCATTGGGTCGGTTTTCACAATCCTTGATAGGTATACGAAAATCAAGCCTGATGAAATAGAAGGTCATAAAGCTAAAAAGTTAATAGGAAAAATCGAATTTTGTGATGTATATTTTGCATATCCGTCTAGACCTAATTTGATGATTTTTCAAGGATTCTCGATTAAAATTGATGCTGGAAAATCGACAGCTCTGGTAGGGAAAAGTGGTTCTGGGAAATCAACGATCATAGGGCTAATTGAGAGGTTCTATGATCCACTTGAAGGGATAGTGACAATTGATGGCAGAGACATAAAAACTTATAATCTAAGGTCATTAAGGAAACAAATTGCACTTGTGAGTCAAGAACCAACATTGTTTGGTGGTACCATAAAAGAAAATATTGCATATGGATCATATGGTGATAAGGTTGATGAGAGTGAAATTATAGAGGCATCAAAGGCTGCAAATGCTCATGATTTCATATCAAGCTTAAAAGATGGTTATGATACATTGTGTGGTGATAGAGGAGTTCAACTTAGTGGTGGTCAAAAACAAAGAATTGCAATAGCTAGAGCTATATTAAAGAATCCAGATGTGTTGCTTTTGGATGAAGCAACAAGTGCACTTGATAGTCAATCAGAGAAATTAGTCCAAGACACTTTAGAAAAGGTCATGGTTGGAAGGACAAGCGTGGTTGTTGCACATAGGTTGAGTACTATCCAAAACTGTGATTTGATTGCTGTTTTGGATAAGGGAAGTGTTGTTGAGAATGGAACACATTCATCTTTGTTGTCTAAAGGGCCAAGTGGAGCATATTACTCTTTGATAAGTATACAAAGAAGACCAACCAACATAATTGTTGATTCTTCACATGAAATCAACTAA 3813 0.3721 MGGGDQKNVSINVKKKKNGSFTSIFMHADVLDCFFMVFGLIGAIGDGLMTPLLLLFLSRLMNSIGSISGPSKNNFVHSINENAVVLLYLACASSVACFLEGYCWTRTGERQAARMRVMYLKAVLRQEVAYFDLHVTSTSEVITSVSNDILVIQDVLSEKVPNFVMNTSIFFGGYIVAFALLWRLAIIGFPFVVLLVIPGFMYGRTMMGLARKMREEYNKAGTIAEQAISSIRTVYSFAGESKTIAAFSNALEGSVKLGLKQGLAKGLGIGSNGLIFAVWSLMSYYGSRMVMYHGTKGGTVFAVGYSIALGGSALGAGLSNVKYFSEASVAGERIMEMIKRVPKIDSKNMEGEILEKVLGEVEFNHVEFVYPSRQESVVLNDFCLKVPSGKTVALVGGSGSGKSTIVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLVSQEPALFATSIKENILFGREDATYEDVVDAAKASNAHNFISMLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKMPKILLLDEATSALDSESERVVQEALDKATVGRTTIIIAHRLSTIQNADIIAVIQKGVIMETGSHESLMQNDNSLYASLVRLQQTKKDQIDDTPSIMHKDHMQNTSSCRLVSPSSSFNSTIQGSDDVFNYKNVVEDVVTKFVVDDDNNDNSKNKKFEVPSFQRLLAMNGPEWKQTCLGCINAVLFGAIQPVFSFGLGSVISVYFLEDHDEIKKQIRIYALCFLGLAVTSMVVNVLQHYSFAYMGEYLTKRVRERMFSKILTFEVGWFDEDQNSTGSVCSRLAKEANVVRSLVGDRLSLVIQTISAVVIAFTMGLLIAWKLAIVMIAVQPIIIYCFYTRFVLLKNMSNKAVKAQDECSKIAAEVVSNLRTINAFSSQDIILKMLEKTQQGPSRESIRQSWFAGIGLACAQSIKLCSYALSFWYGGRLVLQGYISAKALFKTFLILVSTGKVIADAGSMTNDLAKGSDAIGSVFTILDRYTKIKPDEIEGHKAKKLIGKIEFCDVYFAYPSRPNLMIFQGFSIKIDAGKSTALVGKSGSGKSTIIGLIERFYDPLEGIVTIDGRDIKTYNLRSLRKQIALVSQEPTLFGGTIKENIAYGSYGDKVDESEIIEASKAANAHDFISSLKDGYDTLCGDRGVQLSGGQKQRIAIARAILKNPDVLLLDEATSALDSQSEKLVQDTLEKVMVGRTSVVVAHRLSTIQNCDLIAVLDKGSVVENGTHSSLLSKGPSGAYYSLISIQRRPTNIIVDSSHEIN 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03729 1270 CDD ABC_MTABC3_MDL1_MDL2 361 599 - -
Mepo5g03729 1270 CDD ABC_MTABC3_MDL1_MDL2 1014 1255 - -
Mepo5g03729 1270 FunFam ABC transporter B family member 1 23 358 - -
Mepo5g03729 1270 Pfam ABC transporter 1033 1183 IPR003439 GO:0005524
Mepo5g03729 1270 SUPERFAMILY ABC transporter transmembrane region 34 342 IPR036640 GO:0005524|GO:0016020
Mepo5g03729 1270 Pfam ABC transporter transmembrane region 692 962 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03729 1270 Pfam ABC transporter transmembrane region 37 301 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03729 1270 Gene3D - 1004 1261 IPR027417 -
Mepo5g03729 1270 SMART AAA_5 388 580 IPR003593 GO:0016887
Mepo5g03729 1270 SMART AAA_5 1041 1235 IPR003593 GO:0016887
Mepo5g03729 1270 FunFam ABC transporter B family member 4 1004 1260 - -
Mepo5g03729 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1009 1255 IPR027417 -
Mepo5g03729 1270 Gene3D ABC transporter type 1, transmembrane domain 670 993 IPR036640 GO:0005524|GO:0016020
Mepo5g03729 1270 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 37 326 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03729 1270 Pfam ABC transporter 379 528 IPR003439 GO:0005524
Mepo5g03729 1270 Gene3D - 351 600 IPR027417 -
Mepo5g03729 1270 PANTHER ABC TRANSPORTER B FAMILY 10 750 IPR039421 -
Mepo5g03729 1270 ProSitePatterns ABC transporters family signature. 500 514 IPR017871 GO:0005524|GO:0016887
Mepo5g03729 1270 ProSitePatterns ABC transporters family signature. 1155 1169 IPR017871 GO:0005524|GO:0016887
Mepo5g03729 1270 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 361 597 IPR003439 GO:0005524
Mepo5g03729 1270 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 698 979 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03729 1270 Gene3D ABC transporter type 1, transmembrane domain 23 669 IPR036640 GO:0005524|GO:0016020
Mepo5g03729 1270 CDD ABC_6TM_Pgp_ABCB1_D1_like 36 334 - -
Mepo5g03729 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 599 IPR027417 -
Mepo5g03729 1270 SUPERFAMILY ABC transporter transmembrane region 679 992 IPR036640 GO:0005524|GO:0016020
Mepo5g03729 1270 FunFam Putative ABC transporter B family member 8 657 1002 - -
Mepo5g03729 1270 FunFam ABC transporter B family member 4 351 606 - -
Mepo5g03729 1270 Coils Coil 858 878 - -
Mepo5g03729 1270 CDD ABC_6TM_Pgp_ABCB1_D2_like 681 997 - -
Mepo5g03729 1270 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1014 1252 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03729 Mepo-Chr5 46572084 46582069 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03729 2 1256 Calmodulin-binding Proteins AT2G36910 43.451 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03729 K05658 - gmx:100807709 1892.47