Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03728 ATGGGTGGTGGTGATCAGAAAAATGTTTCCATTAATGTTAAGAAAAAGAAAAATGGTTCTTTTAAGTCCATTTTCATGCATGCTGATGTTCTTGATTGTTTTTTCATGGCTTTTGGTTTGATTGGTGCCATTGGTGATGGAATAATGACTCCTTTGGTTTTGTTTATCACAAGCAGAATTATGAACTCTATTGGTACTATTTCTGGCTCATCAAGCAACAATTTTGTACATAACATCAATGAGAATGCTCTGGTTTTATTATATTTGGCATGTGCCTCTTTTGCCGCTTGCTTCCTAGAGGGTTATTGTTGGACAAGAACAGGTGAAAGACAAGCGGCAAGAATGAGAGCTAGGTATCTAAAAGCAGTTCTAAGACAAGAAGTAGCATACTTTGATTTGCATGTTACAAGCACATCAGAAGTCATCACCAGTGTCTCTAACGACAGCCTAGTAATTCAAGATGTTCTTAGTGAAAAGGTTCCAAATTTTTTGATGAATGCATCTATGTTCATTGGAAGCTACATAGTGGCATTCGCATTGTTATGGAGATTAGCAATTGTTGGGTTCCCTTTTGTGGTACTACTTGTGATTCCTGGTTTCATGTATGGGAGAACTTTGATGGGGTTGGCTAGAAAAATGAGAGAAGAGTATAATCAAGCTGGTACAATAGCAGAACAAGCAATATCTTCAATTAGAACTGTTTATTCCTTTGCTGGGGAAAGCAAAACCATAACTGCTTTCTCTGATGCTTTGGAAGGATCAGTGAAGCTGGGATTGAAACAAGGCTTAGCTAAAGGGTTGGCCATAGGAAGCAATGGTGTTGTTTTTGCTATATGGTCTTTTATGTCATATTATGGTAGTAGAATGGTCATGTATCATGGTGCTAAAGGTGGTACTGTATTTGCTGTTGGAGCATCATTAGCACTTGGTGGATTGGCTTTAGGAGCTGGTTTATCAAATGTGAAGTACTTCTCAGAAGCAAGTGTTGCAGGAGAAAGAATAATGGAAATGATAAAAAGAGTTCCAAATATAGATTCTGAAAACATGGAAGGTGAAATTCTAGAGAAAGTCTTGGGGGAAGTTGAATTCAAGCATGTTGAATTTGTGTATCCATCAAGACCAGAAAGTGTGATTTTAAATGATTTTTGCTTAAAGGTTCCATCAGGAAAAACAGTGGCATTAGTAGGAGGAAGTGGTTCAGGAAAATCAACAATTGTATCACTTTTGCAAAGATTTTATGATCCAATTGGTGGAGAAATTCTTCTTGATGGAGTTGCTATTCATAAGTTGCAACTTAAGTGGCTTAGGTCTCAAATGGGTTTAGTGAGTCAAGAACCTGCTTTGTTTGCAACAAGCATTAAGGAGAATATACTTTTTGGTAGAGAGGATGCTACATTTGAAGATGTTGTAGATGCTGCTAAAGCTTCCAATGCTCATAATTTCATTTCTTTGTTGCCACAAGGATATGATACTCAGGTTGGGGAGAGAGGAGTTCAGATGTCAGGGGGACAAAAGCAAAGGATAGCCATTGCAAGGGCCATAATAAAAATGCCTAAAATTCTATTGCTAGATGAAGCAACAAGTGCACTTGATTCCGAATCCGAACGAGTTGTTCAAGAAGCACTAGACAAAGCTGCGGTTGGACGCACCACCATCATCATCGCTCACCGCTTATCTACCATCCAAAATGCAGACATTATTGCCGTTGTTCAAAATGGTAAGATCATGGAAACAGGATCTCACGAAAGCCTCATGCAAAATGACAATTCTCTTTACACCTCCCTCGTTCGTCTCCAACAAACTAGAAATGACCAAAGTGATGACACTCCATCTATCATGAATAGAGGATACATGCAAAACACGAGTAGTCATAGACTAGTGAGTCGTTCTAGTAGCTCTTTCAACTCGATGACGCATGGTGGTGATGATATCCTTAATTATAACAATGCTGTTGAAGATATTGTTAATAATGTTGTTGTCGTTGATGATCATAATAATAATGATAATAAATATAATAAGAAAAAGGAGAAAGTCAAGGTTCCTTCGTTTCGAAGGTTGTTGGCAATGAATGTACCAGAGTGGAAGCAAGCATGTTTGGGTTGTATAAATGCGGTTTTATTCGGTGCAATTCAACCTGTATATTCGTTTGCATTGGGGTCAGTTGTATCAGTTTATTTTCTGGAGGACCATGATGAGATCAAGAAGCAAATTAGGATCTATATATTTTGTTTTCTAGGGTTGGCTGTTATCTCACTGGTTGTTAATGTGCTTCAACATTATAGCTTTGCTTACATGGGAGAGTACTTGACTAAGAGGGTTAGAGAAAGAATGTTTTCCAAGATACTTACTTTTGAAGTTGGTTGGTTTGATGAAGATCAAAATTCTACAGGTTCTGTTTGCTCTAGACTTGCCAAAGAAGCCAATGTGGTAAGATCTTTGGTGGGTGATAGATTGGCTCTAGTGGTACAAACAATTTCAGCAGTGGTAATAGCATTCACAATGGGATTAATCATTGCATGGAGACTAGCCATTGTTATGATAGCAGTTCAACCAGTTATCATATGTTGTTTCTATACAAGACGAGTCCTTCTTAAGAACATGTCAAGCAAAGCTATCAAGGCCCAAGATGAATGTAGCAAAATAGCTGCTGAAGCTGTTTCAAATCTAAGAACCATCAATGCTTTTTCATCTCAAGATAGAATTCTCAAAATGCTTGAAAAAGCACAACAAGGACCAAGCCATGAAAGTATTAGACAATCATGGTTTGCAGGTATTGGACTTGCATGTTCACAAAGTCTCAATTTTTGTACTTGGGCTTTGGACTTTTGGTATGGTGGAAAACTTGTGTCGCAAGGTTATATCTCGGCTAAGGCGTTATTCGAGACTTTTATGATTTTGGTAAGTACAGGAAGAGTTATTGCTGATGCAGGTAGCATGACGAATGATCTTGCTAAAGGCTCTGATGCCGTTGGATCAGTTTTTGCAATCCTCGATAGGTATACAAAAATCGAGCCTGATGATTTAGAAGGTTACAATGCTGAAAAATTAATAGGAAAAATTGAACTTCGTGATGTATATTTTGCATATCCAGCTAGACCTAATGTTATGATTTTTCAAGGGTTCTCGATTAAAATTGAAGCGGGAAAATCAACGGCTTTGGTAGGGGAAAGTGGTTCTGGAAAATCAACAATCATAGGACTAATTGAGAGATTCTATGATCCACTTAAAGGGATAGTGACAATTGACGGTAGAGACATAAAGATATATAATCTCAGGTCATTGAGGAAACACATTGCCCTTGTGAGTCAAGAACCAACATTGTTTAGTGGTACTATAAGGGAAAATATTGCATATGGAGCTTATGATGATGCGGTTGATGAGAGTGAGATTATAGAGGCATCAAAGGCTTCAAATGCTCATGATTTTATATCAAGCTTAAAAGATGGTTATGATACTTTGTGTGGTGATAGAGGAGTTCAACTTAGTGGTGGTCAAAAACAAAGAATTGCAATAGCTAGAGCTATTTTGAAGAATCCAGAGGTATTGCTTTTGGATGAAGCAACAAGTGCACTTGATAGTCAATCAGAAAAATTAGTTCAAGATGCTTTAGAAAAAGTTATGGTTGGAAGGACAAGTGTGGTTGTAGCACATAGGTTGAGTACTATACAAAATTGTGATTTGATTGCAGTTTTGGATAAGGGAAGTGTTGTTGAGAAAGGAACACATTCATCTTTGTTGTCTAAAGGGCCAAGTGGAGCTTATTACTCTTTGGTAAGTCTACAAAGACGACCAACCAACATAATTGTTGATTCTTCACATGAAATCAACTAG 3831 0.3764 MGGGDQKNVSINVKKKKNGSFKSIFMHADVLDCFFMAFGLIGAIGDGIMTPLVLFITSRIMNSIGTISGSSSNNFVHNINENALVLLYLACASFAACFLEGYCWTRTGERQAARMRARYLKAVLRQEVAYFDLHVTSTSEVITSVSNDSLVIQDVLSEKVPNFLMNASMFIGSYIVAFALLWRLAIVGFPFVVLLVIPGFMYGRTLMGLARKMREEYNQAGTIAEQAISSIRTVYSFAGESKTITAFSDALEGSVKLGLKQGLAKGLAIGSNGVVFAIWSFMSYYGSRMVMYHGAKGGTVFAVGASLALGGLALGAGLSNVKYFSEASVAGERIMEMIKRVPNIDSENMEGEILEKVLGEVEFKHVEFVYPSRPESVILNDFCLKVPSGKTVALVGGSGSGKSTIVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLVSQEPALFATSIKENILFGREDATFEDVVDAAKASNAHNFISLLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKMPKILLLDEATSALDSESERVVQEALDKAAVGRTTIIIAHRLSTIQNADIIAVVQNGKIMETGSHESLMQNDNSLYTSLVRLQQTRNDQSDDTPSIMNRGYMQNTSSHRLVSRSSSSFNSMTHGGDDILNYNNAVEDIVNNVVVVDDHNNNDNKYNKKKEKVKVPSFRRLLAMNVPEWKQACLGCINAVLFGAIQPVYSFALGSVVSVYFLEDHDEIKKQIRIYIFCFLGLAVISLVVNVLQHYSFAYMGEYLTKRVRERMFSKILTFEVGWFDEDQNSTGSVCSRLAKEANVVRSLVGDRLALVVQTISAVVIAFTMGLIIAWRLAIVMIAVQPVIICCFYTRRVLLKNMSSKAIKAQDECSKIAAEAVSNLRTINAFSSQDRILKMLEKAQQGPSHESIRQSWFAGIGLACSQSLNFCTWALDFWYGGKLVSQGYISAKALFETFMILVSTGRVIADAGSMTNDLAKGSDAVGSVFAILDRYTKIEPDDLEGYNAEKLIGKIELRDVYFAYPARPNVMIFQGFSIKIEAGKSTALVGESGSGKSTIIGLIERFYDPLKGIVTIDGRDIKIYNLRSLRKHIALVSQEPTLFSGTIRENIAYGAYDDAVDESEIIEASKASNAHDFISSLKDGYDTLCGDRGVQLSGGQKQRIAIARAILKNPEVLLLDEATSALDSQSEKLVQDALEKVMVGRTSVVVAHRLSTIQNCDLIAVLDKGSVVEKGTHSSLLSKGPSGAYYSLVSLQRRPTNIIVDSSHEIN 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03728 1276 Pfam ABC transporter 1039 1189 IPR003439 GO:0005524
Mepo5g03728 1276 CDD ABC_MTABC3_MDL1_MDL2 361 599 - -
Mepo5g03728 1276 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 361 597 IPR003439 GO:0005524
Mepo5g03728 1276 FunFam ABC transporter B family member 1 23 358 - -
Mepo5g03728 1276 Gene3D ABC transporter type 1, transmembrane domain 24 614 IPR036640 GO:0005524|GO:0016020
Mepo5g03728 1276 Gene3D - 1010 1267 IPR027417 -
Mepo5g03728 1276 FunFam Putative ABC transporter B family member 8 661 1008 - -
Mepo5g03728 1276 Gene3D - 351 600 IPR027417 -
Mepo5g03728 1276 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 37 326 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03728 1276 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1020 1258 IPR003439 GO:0005524
Mepo5g03728 1276 CDD ABC_MTABC3_MDL1_MDL2 1020 1261 - -
Mepo5g03728 1276 ProSitePatterns ABC transporters family signature. 1161 1175 IPR017871 GO:0005524|GO:0016887
Mepo5g03728 1276 SMART AAA_5 1047 1241 IPR003593 GO:0016887
Mepo5g03728 1276 SMART AAA_5 388 580 IPR003593 GO:0016887
Mepo5g03728 1276 Pfam ABC transporter transmembrane region 37 302 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03728 1276 Pfam ABC transporter transmembrane region 699 967 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g03728 1276 ProSitePatterns ABC transporters family signature. 500 514 IPR017871 GO:0005524|GO:0016887
Mepo5g03728 1276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 599 IPR027417 -
Mepo5g03728 1276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1015 1261 IPR027417 -
Mepo5g03728 1276 CDD ABC_6TM_Pgp_ABCB1_D1_like 36 334 - -
Mepo5g03728 1276 FunFam ABC transporter B family member 4 1010 1266 - -
Mepo5g03728 1276 CDD ABC_6TM_Pgp_ABCB1_D2_like 687 1003 - -
Mepo5g03728 1276 Pfam ABC transporter 379 528 IPR003439 GO:0005524
Mepo5g03728 1276 SUPERFAMILY ABC transporter transmembrane region 34 342 IPR036640 GO:0005524|GO:0016020
Mepo5g03728 1276 FunFam ABC transporter B family member 4 351 607 - -
Mepo5g03728 1276 Gene3D ABC transporter type 1, transmembrane domain 652 1008 IPR036640 GO:0005524|GO:0016020
Mepo5g03728 1276 PANTHER ABC TRANSPORTER B FAMILY 10 710 IPR039421 -
Mepo5g03728 1276 SUPERFAMILY ABC transporter transmembrane region 684 1004 IPR036640 GO:0005524|GO:0016020
Mepo5g03728 1276 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 704 985 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03728 Mepo-Chr5 46539338 46549281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03728 2 1262 Calmodulin-binding Proteins AT2G36910 44.201 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03728 K05658 - gmx:100807709 1967.59