Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03687 ATGTTCGGTGACGCTCATCGTTTGTTTGGTGTTTCTAACATACAAAAGATACTAAACGAAATCAAGGACAAAGGTAAAAGAGATCAAGCTATGGCATCAATTATTTTTGAGTCGAATATTCGTGCAAAATTTCCAGTAAATGGATGTCTTGATGTTATTAAGCTATATGAAGGTATGTTACTTAAGTCTATTGCGGAGTTAAATCTAACAAATATGTTACTAGCTTATTGTAAGAGAAACAATCATTCACAACAACAAAATCTTCATTACTCCCTACCTTATGGTGATGACCATAATACTATGATAATAGCACCTTCTTCTTATATTGGTGAGATGATTCCTCATGATGCTAATAATACTCTAATTGATACAAATCAGAATATAAATCCTATGGATACAACGAGGGTTAGCAACAGTGGTGTTGTCGATGTTATAGAAGATAATTTGATGGTAACAAAAGGGTTATATGATAATCAAGAATCCGATGACGATAAATTTGTAAGTTTGGATGATGATGTTTTTTTAAACATAGATGACCTCTTGGATGATGTTGACTTCAACAGGTTATTCCGTAGAAATGCGACTAGCTTTCTGGTGGACGGAATTTATGGAAATCCAGGCCCGCTTCATTTTGACGGCCCTGGACCCTGGTGCAGATGCCAAGCTTGTAACTCTTTCTGTTTAAGACCAGGACTACATGCACTGCAGCATTGTCCCATTTAG 723 0.3596 MFGDAHRLFGVSNIQKILNEIKDKGKRDQAMASIIFESNIRAKFPVNGCLDVIKLYEGMLLKSIAELNLTNMLLAYCKRNNHSQQQNLHYSLPYGDDHNTMIIAPSSYIGEMIPHDANNTLIDTNQNINPMDTTRVSNSGVVDVIEDNLMVTKGLYDNQESDDDKFVSLDDDVFLNIDDLLDDVDFNRLFRRNATSFLVDGIYGNPGPLHFDGPGPWCRCQACNSFCLRPGLHALQHCPI 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03687 240 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 97 - -
Mepo5g03687 240 Pfam Lateral organ boundaries (LOB) domain 2 68 IPR004883 -
Mepo5g03687 240 ProSiteProfiles LOB domain profile. 1 74 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03687 Mepo-Chr5 45880615 45884005 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03687 1 74 AS2 family AT3G47870 41.892 1.96e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo5g03687 LOB 1.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03687 - - mtr:25495258 172.94