Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03686 ATGAATATCACCAAACCAAAGAAGGCTTGTGCAGCATGCAAGTATCAAAGAAGAAAGTGCACTAGAGAGTGTGTTTTAGCTCCTTATTTTCCGGCCGATGAACCAAAGATGTTCGGCGATGCTCATCGTTTGTTTGGTGTTTCAAACATACAGAAGATACTAAACGAAATTAAGGATGGTGATCAAAGAGATGAAGCAATGAAATCAATAATTATTGAGTCGAAAATTCGTGCAAATTTCCCAATTCATGGATGTCTTGGTGTTATTCATATGTATGCAGGTATGATAAATGAGTCTTCTAAAGAGTTAAAACAATTAAAATGGCTATTAGCTTATTGTAAGCAAAACAACCATTTACAACAACAAAATCTTTATTCCTCCATACCTTCTACTAGTTTTCAAGTGTTTAACAATTATGGTGATGTTTGTAATTATTATCACAATAGTGAAAATAATATGATGATACCATCTTCTTCTTATGTTAGTGAAACCACCCCTCATGATGTTAATAATTCTCTAATTGATACAAACTTCAATATAAATTCTATGGATACAAGGGTTGCAAAATTGAGTGGTGATAGCAACCCTAGTGGGGACAATGTCAAATTAGAATTGGACAATAATGAAGATTTGGATGACTTTGATATACAAATTAGAACAATATTTGATTGGGAGGAAACAGAAGGATTTTTAGATACTGATGAATTACCTAGTTCGGATTTTAATATAAGATGA 735 0.3252 MNITKPKKACAACKYQRRKCTRECVLAPYFPADEPKMFGDAHRLFGVSNIQKILNEIKDGDQRDEAMKSIIIESKIRANFPIHGCLGVIHMYAGMINESSKELKQLKWLLAYCKQNNHLQQQNLYSSIPSTSFQVFNNYGDVCNYYHNSENNMMIPSSSYVSETTPHDVNNSLIDTNFNINSMDTRVAKLSGDSNPSGDNVKLELDNNEDLDDFDIQIRTIFDWEETEGFLDTDELPSSDFNIR 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03686 244 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
Mepo5g03686 244 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 147 - -
Mepo5g03686 244 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03686 Mepo-Chr5 45875093 45875827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03686 9 104 AS2 family AT3G47870 57.292 7.27e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo5g03686 LOB 4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03686 - - mtr:25495258 387.497