Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03684 ATGAATATCAACAGAGGAGACACAAGCAAGGCTTGTGCATCCTGCAAATTCCAAAGAAGAAAATGTTCAAAAGATTGTCTTCTAGCTCCTTATTTTCCTGCTGATAAACCACAAGTGTTCGGCAACGCTCATCGTTTGTTCGGTGTTTCCAACGTATCGAAGATATTAAAGCAAGTTAAGGAAGAATATAGAGATGAAGCAATGAAATCAATTATTTTTGAGTCGGATATGCGTGCTCAATTCCCTGTTGGTGGATGTCTTGATGTTATTATGATGTATTATGGTATGATCAATGCTTCTGAGCAAGAACTAAAGAACGTTAAATTTTTACTAGATCATTGTAAGGTAAATTGCCCTTTGCAACAACAAAATCTTGAACCCTACTTATCAATTGATCATTCTTCTGCTCCTTCTAGTAACACTCAAGTTCCGAATCCGTATTATGATATCCCTCATAATGTTACTATTAGCCCAAGGGTTACACAATTGATCAGTGGTGTTAGCAATAATGGTGGTGGCAATGCAATCGAAGAAAAATCTAACTTGATGGTAACACAAGGACTATTCCATTGTGAAGAATTATTGGACCTTAATGGTAGTACAAATTTTGATATAAGGGAAAAGGAGAAAATATCAGATGCTGATAAAGTAGTAACTGAGATGAAACCAATTGCTAAATGA 681 0.3568 MNINRGDTSKACASCKFQRRKCSKDCLLAPYFPADKPQVFGNAHRLFGVSNVSKILKQVKEEYRDEAMKSIIFESDMRAQFPVGGCLDVIMMYYGMINASEQELKNVKFLLDHCKVNCPLQQQNLEPYLSIDHSSAPSSNTQVPNPYYDIPHNVTISPRVTQLISGVSNNGGGNAIEEKSNLMVTQGLFHCEELLDLNGSTNFDIREKEKISDADKVVTEMKPIAK 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03684 226 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Mepo5g03684 226 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 133 - -
Mepo5g03684 226 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03684 Mepo-Chr5 45859587 45861635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03684 5 107 AS2 family AT3G47870 55.340 9.72e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo5g03684 LOB 7.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03684 - - mtr:25495260 337.421