Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03683 ATGAATATCAACAGAGGAGACACAAGCAAGGCTTGTGCATCCTGCAAATTCCAAAGAAGAAAATGTTCAAAAGATTGTCTTCTAGCTCCTTATTTTCCTGCTGATAAACCACAAGTGTTCGGCAACGCTCATCGTTTGTTCGGTGTTTCCAACGTATCGAAGATATTAAAGCAAGTTAAGGAAGAATATAGAGATGAAGCAATGAAATCAATTATTTTTGAGTCGGATATGCGTGCTCAATTCCCTGTTGGTGGATGTCTTGATGTTATTATGATGTATCTTGGTATGATCAATGCTTCTGAGCAAGAACTAAAGAACGTTAAATTTTTACTAGATCATTGTAAGGTAAATTGCCCTTTGCAACAACAAAATCTTGAACCCTACTTATCAATTGATCATTCTTCTGCTCTTTTTAGTAGCACTCAAGTTCCGAATCCTTATTATGACATCCCTCATAATGTTATTATTAGCCCAATTGATACCAAACAAGACTTTGAAACTAATTCTATGGATGCAGCAAGGGTTACACAATTGAGTGGTGTTAGCAATAATGGTGGTGGCAATGCAATGGAAGAAAAATCTAGCTTGATGGTAACACAAGGACTATTCCATTGTGAAGAATTATTGGATCTTAATAGTAGTAGTACAAAATTTGATTTGAGGGAAAAGGAGAAAATATCAGTTGTTGATAAAGTAGTAAATGAGATGAAACCAGTTGCTAAATGA 726 0.3526 MNINRGDTSKACASCKFQRRKCSKDCLLAPYFPADKPQVFGNAHRLFGVSNVSKILKQVKEEYRDEAMKSIIFESDMRAQFPVGGCLDVIMMYLGMINASEQELKNVKFLLDHCKVNCPLQQQNLEPYLSIDHSSALFSSTQVPNPYYDIPHNVIISPIDTKQDFETNSMDAARVTQLSGVSNNGGGNAMEEKSSLMVTQGLFHCEELLDLNSSSTKFDLREKEKISVVDKVVNEMKPVAK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03683 241 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Mepo5g03683 241 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Mepo5g03683 241 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03683 Mepo-Chr5 45843828 45845886 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03683 5 107 AS2 family AT3G47870 55.340 8.15e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo5g03683 LOB 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03683 - - mtr:25495260 339.347