Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03679 ATGAATATCAAGAAATCAAACAAAGTTTGTGCAGCATGCAAGTATCAAAGGAAAAAGTGTCCCAAAGATTGTCCTTTAGCTCCTTACTTTCCAATCGATAAACCAAAAAGGTTTGACAATGTTCATAATTTGTTTGGTGTTACCAACATAGTGAAGTTACTAAAGAATATTAAAGACGACGATATAAAAGCCGATGCAATGGATTCAATTATTTTTGAGTCGGATATTCGTGCAAAATTCCCCGTTCATGGATGTGTTGCTGTTATTCATTATTACTTAGGTTTGATACGTGAGTCTGAAGAAGAGTTAAATCGCACACAAGGTTTGCTAGCTATGTGTAAGATGAACAACCATTCACAACAACAAAATCTCCATTCCTCCCTACCTTCAACTGCTCCTCCAGTAACAAATATTCCATCCTTTACGTTGGATGACCTTGATAACGAAGAATTGAATGACCTTGATGGTGGTGTTGATGCTGGTTGGGATCTTGATCCAGATGACTTTTTTAAGGATATAGAAGAATATGAGGAAAGGATGCTTATGTAA 549 0.3625 MNIKKSNKVCAACKYQRKKCPKDCPLAPYFPIDKPKRFDNVHNLFGVTNIVKLLKNIKDDDIKADAMDSIIFESDIRAKFPVHGCVAVIHYYLGLIRESEEELNRTQGLLAMCKMNNHSQQQNLHSSLPSTAPPVTNIPSFTLDDLDNEELNDLDGGVDAGWDLDPDDFFKDIEEYEERMLM 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03679 182 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Mepo5g03679 182 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
Mepo5g03679 182 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03679 Mepo-Chr5 45825139 45825687 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03679 6 114 AS2 family AT3G47870 49.541 4.62e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo5g03679 LOB 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03679 - - mtr:25495262 319.701