Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03662 ATGACCCAGAAGAAGAAAGGGAAACAAGTTTATCTAGGGGCTTATGACGACGAAGAATCAGCTGCGAGAGCATATGATTTAGCTGCACTAAAGTACTGGGGAACAATGACCGTCACCAATTTTCCTGTCTCAGATTATGAGGAACAGGTGGAGATAATGCAAACTATGACAAAAGAGGAGTATTTAGCAACCTTAAGGAGAAAGAGCAGTGGATTTTCAAGAGGCGCATCAAAGTATAGGGGTGTTGCAAGGCACCACCACAACGGTAGATGGGAAGCACGAATCGGAAGGGTTTTTGGAAACAAGTATCTCTACCTTGGAACCTACAGCACCCAAGAGGAAGCTGCTCGTGCTTATGACATAGCAGCTATTGAGTACAGAGGGAGTCATGCGATAACAAACTTCGACTTGAGTACTTACATGAGATGGTTAAAATCTTCAACAGAAAATATCTCAGAAACAAAAGTTGAAAAACTGGAAGTACCAGAGTCTCAGGCAGTGGCAATTCAATCTAACTATTCTCCAATAGAGGGGTCCAAATCCTTAGCCCTCCACAACACTACTTATAATTCAGATTATCTGAATTCCGCTCAAAAGTACGAAGTTTTTGACAATAAAACATACCAAATGTCCAGCACTAAGTCATGTTCTTCTCCCACTGCACTTGGACTACTTTTCCGCTCTACAATATTTAGAGAGTTAGTTCAAAAGAATTCGAACATGTCTGGAGATGAAACTGATGGGGAAGACACAAAGGATAAACAGCCACGGACAGCAGCAAGTGATGATGAGTTGGATGGGATCTTCTGTGATGGAATTGGGGATACCCCCTTTCTGAAACCCCAATGGACACCTTAG 858 0.4242 MTQKKKGKQVYLGAYDDEESAARAYDLAALKYWGTMTVTNFPVSDYEEQVEIMQTMTKEEYLATLRRKSSGFSRGASKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGSHAITNFDLSTYMRWLKSSTENISETKVEKLEVPESQAVAIQSNYSPIEGSKSLALHNTTYNSDYLNSAQKYEVFDNKTYQMSSTKSCSSPTALGLLFRSTIFRELVQKNSNMSGDETDGEDTKDKQPRTAASDDELDGIFCDGIGDTPFLKPQWTP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03662 285 FunFam AP2-like ethylene-responsive transcription factor 77 138 - -
Mepo5g03662 285 Pfam AP2 domain 4 34 IPR001471 GO:0003700|GO:0006355
Mepo5g03662 285 Pfam AP2 domain 77 128 IPR001471 GO:0003700|GO:0006355
Mepo5g03662 285 SUPERFAMILY DNA-binding domain 5 44 IPR016177 GO:0003677
Mepo5g03662 285 CDD AP2 1 44 IPR001471 GO:0003700|GO:0006355
Mepo5g03662 285 SMART rav1_2 2 48 IPR001471 GO:0003700|GO:0006355
Mepo5g03662 285 SMART rav1_2 78 142 IPR001471 GO:0003700|GO:0006355
Mepo5g03662 285 ProSiteProfiles AP2/ERF domain profile. 78 136 IPR001471 GO:0003700|GO:0006355
Mepo5g03662 285 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 2 198 - -
Mepo5g03662 285 MobiDBLite consensus disorder prediction 243 261 - -
Mepo5g03662 285 ProSiteProfiles AP2/ERF domain profile. 1 42 IPR001471 GO:0003700|GO:0006355
Mepo5g03662 285 MobiDBLite consensus disorder prediction 238 285 - -
Mepo5g03662 285 SUPERFAMILY DNA-binding domain 77 138 IPR016177 GO:0003677
Mepo5g03662 285 CDD AP2 77 138 IPR001471 GO:0003700|GO:0006355
Mepo5g03662 285 Gene3D AP2/ERF domain 1 44 IPR036955 GO:0003700|GO:0006355
Mepo5g03662 285 Gene3D AP2/ERF domain 77 138 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03662 Mepo-Chr5 45639103 45641013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03662 8 47 AP2-EREBP Transcription Factor Family AT5G57390 50.000 4.20e-06 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mepo5g03662 AP2 4.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03662 - - ahf:112716370 421.009