Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03657 ATGAAGGTCAAGTTTTTATTTAGTTGCATGTCCAAAAGCTCATCTCGTGGCAAGCACACACAAAATGATGATAAGGCCGTTGCTGGTGCTCAAAATTCTTCAAATCCCATTGGTGTACATTATAATTCCAATCTTAACCAATTCACGTATCAAGAACTGAAGTCAGCAACAGGACATTTCACACCAGAATGTTTTCTTGGTGAAGGTGGTTTTGGTTCTGTGTATAAAGGTTGGATAGGTCAAAACGGGAGGATTTCTTCAAGACCTGGAATGGGGGTACCAGTTGCTGTAAAAACCCTAAACAAAGAAGGAAATCAAGGGCACAAAGAATGGCTGGCTGAAATTAACCATCTTGGTGCTCTTCAGCATCCAAATCTGGTTAGACTTATTGGTTACTGCATTGAAGATGAAAATAGGCTGCTTGTTTATGAGTTTATGCCAAAAGGAAGCCTTGAAAATCATCTATTTAAGAGACGATCTGCACCCCTTACTTGGGCTATAAGATTGAAAATTATGCTTGGTGCTGCAAAAGGTCTTGCATTTCTGCATGAGGAAGCTGAGAAGCCAATCATATATAGAGATTTCAAAACTTCTAATATCCTATTGGATTCGAATTATAATGCAAAACTTTCTGACTTTGGACTTGCTAAGGATGGTCCAATGGGAGACAACACACATGTGTCAACACAGGTGATAGGAACTCAAGGGTATGCAGATCCTGAGTATGTCATGACAGGCCACCTTAGTTCCAAGAGTGATGTCTACAGCTTTGGTGTGGTTCTCCTGGAGATGTTAACCGGAAGGAAAGCAATCGATAGGAAAAGGCCGGAGAATGAACAAACCTTGATTCAATGGGTAAAACCCTTCTTAAAAAAACCTGGAGGAGGGTTCTGTGAAGTGATGGATCCAAGATTTCAAGAACAATATTCAAAAAGAGGAGCATACAAAGCAATGAAAATAGTTGCACATTGCGTTTACCGTGATAAAAAAGCAAGGCCTTTGATGAGTGAAGTTGTAAAGGAGCTCAAAACTATCATTGATTACAACAATGATATTCCTTCTTCACCAATGCCATCGCCACTATCGTTTAAGGTCTTGCATGATGGCGCTTCCTCTTCTAATTCAACTAGACATGGTGGTGGCGGCAACGGTGCTTATAAATATGGTCCTACAATTGGTTCATCATCTTCAGCTTCAACTCCAGCTCGATTTCAGGGTTCGCCATTGAACTTTACTCCTCCTTTACTTTCACCGATTCCTCCTCGTGGTGGAAATCCATGA 1281 0.4075 MKVKFLFSCMSKSSSRGKHTQNDDKAVAGAQNSSNPIGVHYNSNLNQFTYQELKSATGHFTPECFLGEGGFGSVYKGWIGQNGRISSRPGMGVPVAVKTLNKEGNQGHKEWLAEINHLGALQHPNLVRLIGYCIEDENRLLVYEFMPKGSLENHLFKRRSAPLTWAIRLKIMLGAAKGLAFLHEEAEKPIIYRDFKTSNILLDSNYNAKLSDFGLAKDGPMGDNTHVSTQVIGTQGYADPEYVMTGHLSSKSDVYSFGVVLLEMLTGRKAIDRKRPENEQTLIQWVKPFLKKPGGGFCEVMDPRFQEQYSKRGAYKAMKIVAHCVYRDKKARPLMSEVVKELKTIIDYNNDIPSSPMPSPLSFKVLHDGASSSNSTRHGGGGNGAYKYGPTIGSSSSASTPARFQGSPLNFTPPLLSPIPPRGGNP 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03657 426 ProSitePatterns Protein kinases ATP-binding region signature. 66 98 IPR017441 GO:0005524
Mepo5g03657 426 FunFam Serine/threonine-protein kinase BIK1 28 145 - -
Mepo5g03657 426 MobiDBLite consensus disorder prediction 368 426 - -
Mepo5g03657 426 MobiDBLite consensus disorder prediction 13 33 - -
Mepo5g03657 426 SUPERFAMILY Protein kinase-like (PK-like) 45 368 IPR011009 -
Mepo5g03657 426 Pfam Protein tyrosine and serine/threonine kinase 66 342 IPR001245 GO:0004672|GO:0006468
Mepo5g03657 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Mepo5g03657 426 PANTHER OS01G0588500 PROTEIN-RELATED 26 344 - -
Mepo5g03657 426 CDD STKc_IRAK 66 345 - -
Mepo5g03657 426 ProSiteProfiles Protein kinase domain profile. 60 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03657 426 Gene3D Phosphorylase Kinase; domain 1 36 145 - -
Mepo5g03657 426 FunFam Serine/threonine-protein kinase PBS1 146 357 - -
Mepo5g03657 426 MobiDBLite consensus disorder prediction 389 412 - -
Mepo5g03657 426 Gene3D Transferase(Phosphotransferase) domain 1 146 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03657 Mepo-Chr5 45556473 45560282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03657 20 342 Glycoside Hydrolase AT3G07070 47.401 2.67e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo5g03657 PK_Tyr_Ser-Thr 4.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03657 - - mtr:25490803 729.169