Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03646 ATGGAGGAAAGAACTGAGATGGATATTAATAAGGTTGATGATTTGATGCCTGGATTTCGTTTTCATCCCACAGATGAAGAGCTTGTTGGTTTTTATCTCAAGAGAAAAATTCAGCAAAAATCTCTTCCTATTGAACTTATTAAGCAAGTGGATATTTACAAACATGATCCATGGGACCTTCCAAAGCTAGCAAGTAGTGGTGAAAAAGAATGGTATTTCTATTGTCCAAGGGACAGAAAATATAGAAACAGTTCAAGACCTAATAGAGTTACAAGAGCTGGATTTTGGAAGGCAACTGGAACTGATAGACCTATATACTCATCAGATGGAAAATGCATTGGTTTGAAGAAGTCACTTGTCTTCTATAAGGGCAGAGCTGCCAAAGGGATGAAAACTGATTGGATGATGCATGAGTTTAGGTTACCTTGCATTTCAGATTCAAACTCTGCTCCTAAAAAGTTTTCAGATAAAAGTTTCTCTCCAAATGATTCATGGGCAATCTGTAGGATCTTCAAGAAAACCAATTCCCTTTCCATGGTACAAAAAGCATTGTCTCACCCTTGGATCTCCCAATTACCAGGAAGCATGGTTACTGAATTACTCACACAAACTACAAATATCAACCAATTCTGTTCAGAAAATAATATATCATGTACAACAGAACAAGGATCATCAGCAGGAACAAACTTACAAATCAACAAGCATGAGCTACAACAAGTCTCCAATACCAACTTCTCAACTTCAGATTTTCCAAATTACAAACCAATCAACAACATCAACACAATTTCCAAATCCTCACAAATTCCTGTTCCTAATGGAGACATTATTGATAACCTAATGTTCTACACACTTGAGGCCAATGGTTCCACAACGTGCACAATTGATGATAGTTCAATTCTTTCCAACACTAACTATATTGGTTTTGAAGATGCAAATAATCAATATAATGGCTTCTCAATTAGTTTACCTCAAGACATGCAACCAAACATTGTGAATATTCAAGATCAAATGCAGCTTAATCAATGGGAAAATCTTGGAAGAACAATTGAATTTCCATTCAATTTGTCTCCAAGTTTTGATGCTTTGAGGACCAGTGTTACATGGGACTCACCACCTTGCACTAGTGAAATGTCGACAACCTATGTCACTAGTAAATGTTACACTTAG 1167 0.3633 MEERTEMDINKVDDLMPGFRFHPTDEELVGFYLKRKIQQKSLPIELIKQVDIYKHDPWDLPKLASSGEKEWYFYCPRDRKYRNSSRPNRVTRAGFWKATGTDRPIYSSDGKCIGLKKSLVFYKGRAAKGMKTDWMMHEFRLPCISDSNSAPKKFSDKSFSPNDSWAICRIFKKTNSLSMVQKALSHPWISQLPGSMVTELLTQTTNINQFCSENNISCTTEQGSSAGTNLQINKHELQQVSNTNFSTSDFPNYKPINNINTISKSSQIPVPNGDIIDNLMFYTLEANGSTTCTIDDSSILSNTNYIGFEDANNQYNGFSISLPQDMQPNIVNIQDQMQLNQWENLGRTIEFPFNLSPSFDALRTSVTWDSPPCTSEMSTTYVTSKCYT 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03646 388 Gene3D NAC domain 24 178 IPR036093 GO:0003677|GO:0006355
Mepo5g03646 388 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Mepo5g03646 388 SUPERFAMILY NAC domain 13 173 IPR036093 GO:0003677|GO:0006355
Mepo5g03646 388 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 239 - -
Mepo5g03646 388 ProSiteProfiles NAC domain profile. 15 173 IPR003441 GO:0003677|GO:0006355
Mepo5g03646 388 FunFam NAC domain-containing protein 35 24 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03646 Mepo-Chr5 45302810 45305859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03646 1 263 NAC Transcription Factor Family AT1G26870 56.989 1.10e-98 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo5g03646 NAM 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03646 - - mtr:25495303 781.941