Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo5g03645 | ATGGCAAGCACACCTAGTATTCCATCTCATACAAAAGCTTGGGTTTATTCTCAATATGGTAACATAGAAGAGATTCTAAAGTTTGATCCTAATGTCCCTACACCACACCCCAAAGAAGATCAAGTGCTCATCAAGGTTGTGGCAGCTGCCCTTAATCCTGTTGATAGTCACAGGGCTCTTGGTCATTTCAAGGACATTGACTCTCCTTTGCCAACTGTGCCAGGACATGATGTAGCTGGTGTGGTGGTTAGTGTGGGAGACCAAGTGAAGAAATTTAAGGTTGGAGATGAAGTTTATGGTGATATCAATGAGATTACTTTACAAAATCCAAAAACTATTGGTACTTTGTCCGAGTATACTGTTGCTGAAGAAAAAGTACTTGCTCACAAACCATCACATTTGAGTTTTGTTGAAGCTGCTAGTCTCCCTTTAGCAATAATTACTACTTATCAAGGACTTGAAAGAGTTGAATTTTCTTCTGGTAAATCTATACTTGTTCTTGGAGGTGCTGGAGGAGTTGGATCTCTTGTTATTCAGCTAGCCAAGCATGTTTTTGAGGCATCTAGAATTGCAGCTACTGCTAGCACAACAAAACTTGAATTTTTGAGGATATTGGGAGCAGACTTGGCAATTGATTATATACTAAGGAGAATTATGAAGAACTTACTGAAAAATTTGATGTGGTGTATGATACAGTAG | 699 | 0.3891 | MASTPSIPSHTKAWVYSQYGNIEEILKFDPNVPTPHPKEDQVLIKVVAAALNPVDSHRALGHFKDIDSPLPTVPGHDVAGVVVSVGDQVKKFKVGDEVYGDINEITLQNPKTIGTLSEYTVAEEKVLAHKPSHLSFVEAASLPLAIITTYQGLERVEFSSGKSILVLGGAGGVGSLVIQLAKHVFEASRIAATASTTKLEFLRILGADLAIDYILRRIMKNLLKNLMWCMIQ | 232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo5g03645 | 232 | Pfam | Alcohol dehydrogenase GroES-like domain | 40 | 101 | IPR013154 | - | |
| Mepo5g03645 | 232 | Gene3D | - | 162 | 227 | - | - | |
| Mepo5g03645 | 232 | Gene3D | - | 9 | 161 | - | - | |
| Mepo5g03645 | 232 | SMART | PKS_ER_names_mod | 20 | 231 | IPR020843 | GO:0016491 | |
| Mepo5g03645 | 232 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 134 | 223 | IPR036291 | - | |
| Mepo5g03645 | 232 | CDD | MDR_like_2 | 12 | 213 | - | - | |
| Mepo5g03645 | 232 | SUPERFAMILY | GroES-like | 8 | 166 | IPR011032 | - | |
| Mepo5g03645 | 232 | PANTHER | NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC | 3 | 214 | IPR044626 | GO:0016628 | |
| Mepo5g03645 | 232 | ProSitePatterns | Quinone oxidoreductase / zeta-crystallin signature. | 161 | 182 | IPR002364 | GO:0008270|GO:0016491 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo5g03645 | Mepo-Chr5 | 45270610 | 45273566 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mepo5g03645 | 67 | 226 | Monolignol Biosynthesis Gene Families | AT1G72680 | 29.032 | 1.02e-07 | 50.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo5g03645 | K18980 | - | gmx:100791274 | 310.457 |