Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03643 ATGGTTAGACCACCATGTTGTGATAAAGAAGGTGTGAAAAAAGGACCTTGGACTCCTGAAGAAGATATCATTTTGGTTTCTTATATTCAAGAACATGGTCCTGGAAATTGGAAAGCTGTTCCTACCAATACTGGTTTGTTAAGGTGTAGTAAGAGTTGCAGACTTAGATGGACAAATTATCTAAGGCCAGGAATCAAAAGGGGTAACTTCACTGACCAAGAAGAGAAAATGATTATTCATCTTCAAGCTCTTTTAGGAAACAGATGGGCTGCCATAGCTGCATACCTTCCACAAAGAACAGACAATGACATAAAAAATTATTGGAACACTTATTTGAAGAAAAAGCTGAAAAAATTGGAAACAAGTACTTCTTCTGAATCATGTTTAGGTCATGATGAATTCTCAGTTTCTCAACCAATAGCTAGAGGACAATGGGAAAGAAGACTTCAAACTGACATTCACATGGCCAAAAAAGCACTTAGTGAAGCTCTTCAACCAGAAAAAAGCACTTCTAGTAGCAACTTAATGTTACCACTTGAATCAAATTTTTCTAGTGAAAGCTCTTTTTGTTCAACAAAACCTACAACTCAATCTTTGTCTTATGCATCAAGTGCTGATAACATAGCTCGTTTGTTGAAAGGTTGGATGAAAAATAAACCTAAAGAAGGATCAAATGGTAATGACACAAATGTGACACAAAATTATGAGACTAGTGCTTCCAGTGAAGGAATGGAAAAAGGGTCAACAAGTGTTGAATTATCTGAGACTTTTGAATCTTTGTTTGGTTATGAGTCTTTTGATTCATCAAATTCTGATTCTACTACTCTTTTTCAAGATGAGAGCAAACCTGAAAATATTGGTGAAATTATGCCTTTCTCTATGCTTGAAAAATGGCTTCTAGATGATGGTGCTTGTCAAGAGAAAGTTGGTCTTAGTGAAATTAATTACATATTTTGA 957 0.3511 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLETSTSSESCLGHDEFSVSQPIARGQWERRLQTDIHMAKKALSEALQPEKSTSSSNLMLPLESNFSSESSFCSTKPTTQSLSYASSADNIARLLKGWMKNKPKEGSNGNDTNVTQNYETSASSEGMEKGSTSVELSETFESLFGYESFDSSNSDSTTLFQDESKPENIGEIMPFSMLEKWLLDDGACQEKVGLSEINYIF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03643 318 CDD SANT 16 61 IPR001005 -
Mepo5g03643 318 Gene3D - 69 131 - -
Mepo5g03643 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mepo5g03643 318 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo5g03643 318 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo5g03643 318 Gene3D - 13 66 - -
Mepo5g03643 318 CDD SANT 69 111 IPR001005 -
Mepo5g03643 318 SMART sant 66 114 IPR001005 -
Mepo5g03643 318 SMART sant 13 63 IPR001005 -
Mepo5g03643 318 MobiDBLite consensus disorder prediction 222 247 - -
Mepo5g03643 318 FunFam MYB-related transcription factor 13 66 - -
Mepo5g03643 318 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mepo5g03643 318 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 246 - -
Mepo5g03643 318 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mepo5g03643 318 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo5g03643 318 MobiDBLite consensus disorder prediction 217 247 - -
Mepo5g03643 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03643 Mepo-Chr5 45212734 45214945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03643 1 312 MYB Transcription Factor Family AT5G62470 50.700 2.15e-100 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo5g03643 Myb_DNA-binding 4.1e-15 CL0123