Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03641 ATGATGGAAGTTTTAACAACAACAACCACCACCACAAACACAAACACAACCTCAAACTCCACAAACACTACTACATCTTTAACAACAAATCTAACAAAAACACAAGAACCCGAATCAGAAAACCCGACCCGAATCCAACAACCCATATTATCAAACATAACAAAACCTTTGTCTTTTTCAAATGGTGTTCTCAAACGCCACCACCCCAACCACCACAACAACAACCTTAACAACCACCACAACAACGTTAATAATAACCTTAACAACGTTGTTGTTACTTACAAAGAATGTCTCAAAAACCACGTGGCAACCCTAGGTGGTCATGCCCTAGACGGTTGTTGTGAATTCATGCCATCACCAACCGCCACCTCCGATGACCCCGCCTCCATAAAATGTGCGGCATGTGGTTGTCACCGGAATTTCCACCGCCGTGAACCGGAAGAACCAATTTCCACCGTTTTTGAATATCAACCTCATCACCGTCACCACCCACCACCACCACCACTTTTCCAGTCACGTTCACCAAGCTCACCATCACCACCACCGATCTCATCATACCCATCAGCTCCACATATGCTCCTAGCACTCTCCGGCGCCGGTGTTGGTCTCTCAATCCCACCGGAAAACACAGCTGCACCGTTAAACCACCTAAGTTCTCCTATGGGAACAAGTAGAAAAAGATTCAGAACAAAATTCACACAAGAACAGAAAGAGAAGATGCATGAATTTGCTGAGAAAGTTGGGTGGAAGATGCAGAAGAGAGATGAAGAAATGGTGAATGGTTTTTGCAATGAAGTTGGTGTTGATAGAAGTGTTCTCAAAGTTTGGATGCATAATAATAAGAACACTTTGGGAAGAAAATTATCATTAGATCATGGTAATGGTGACAGCGCCGCCGTGAACGCCGCCGTGGACGGTGGTTCTGGTGGTGGTTGTGAGAATGAGAATAATGGTAGTAATGTTGCTGCTTGTGCTACTACTAATGGGTCTTCTTCTTCTTCTTGA 1005 0.4428 MMEVLTTTTTTTNTNTTSNSTNTTTSLTTNLTKTQEPESENPTRIQQPILSNITKPLSFSNGVLKRHHPNHHNNNLNNHHNNVNNNLNNVVVTYKECLKNHVATLGGHALDGCCEFMPSPTATSDDPASIKCAACGCHRNFHRREPEEPISTVFEYQPHHRHHPPPPPLFQSRSPSSPSPPPISSYPSAPHMLLALSGAGVGLSIPPENTAAPLNHLSSPMGTSRKRFRTKFTQEQKEKMHEFAEKVGWKMQKRDEEMVNGFCNEVGVDRSVLKVWMHNNKNTLGRKLSLDHGNGDSAAVNAAVDGGSGGGCENENNGSNVAACATTNGSSSSS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03641 334 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 94 145 IPR006456 -
Mepo5g03641 334 MobiDBLite consensus disorder prediction 312 334 - -
Mepo5g03641 334 MobiDBLite consensus disorder prediction 1 42 - -
Mepo5g03641 334 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 70 284 - -
Mepo5g03641 334 Pfam ZF-HD protein dimerisation region 92 146 IPR006456 -
Mepo5g03641 334 SUPERFAMILY Homeodomain-like 216 286 IPR009057 -
Mepo5g03641 334 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 93 145 IPR006456 -
Mepo5g03641 334 Gene3D - 215 285 - -
Mepo5g03641 334 NCBIfam homeobox domain, ZF-HD class 225 282 IPR006455 -
Mepo5g03641 334 MobiDBLite consensus disorder prediction 163 186 - -
Mepo5g03641 334 MobiDBLite consensus disorder prediction 157 186 - -
Mepo5g03641 334 FunFam Zinc-finger homeodomain protein 2 214 286 - -
Mepo5g03641 334 MobiDBLite consensus disorder prediction 304 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03641 Mepo-Chr5 45147255 45148815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03641 23 281 ZF-HD Transcription Factor Family AT5G15210 51.311 9.79e-73 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mepo5g03641 ZF-HD_dimer 3.4e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g03641 5 45147255 45148815 Mepo3g00141 3 2018676 2020213 PCT