Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03620 ATGGCACCTTTTGTATTGACAGTGTCACAAAATGGAACCGGAAACTACAGAACTGTACAAGAAGCTATTGATGCAGTGCCACTCAGAAACACACGCCGGACGATCATAAGGATATCTCCGGGAATCTACCGACAACCACTTTACGTGGCAAAGACTAAGAATTTCATCACTTTCGTTGGTTTGTGTCCTGAGGATACTATTCTCACATGGAACAACACTGCCAATAAAATTGATCACCAACAAAGTTCTAAGGTGATAGGAAATGGGACTTTTGGTTGTGGAAGTACCATCGTGGAAGGGGAAGACTTTATTGCTGAGAATATTACTTTTGAGAATTTTTCTCCTGAGGGTTCAGGGCAAGCAGTGGCAGTTAGAGTATCAGCAGATAGATGTGCTTTTTATAACTGCAGGTTTCTTGGGTGGCAGGACACACTTTATTTACATTATGGCAAACAATATTTGAAAGATTGTTATATTGAAGGAAGTGTGGACTTCATATTTGGTAATAGCACTGCCCTCATGGAGCATTGTCATATCCACTGCAAGTCTGCAGGGTTCATAACTGCACAGAGCAGAAAATCTCCACATGAAAAAACTGGTTATGTATTTATGAGATGTGCTATCACAGGCAATGGAGGAAGTTCATATGCATATCTTGGAAGGCCATGGGGACCTTTTGGAAGAGTGGTCTTTGCATTTACTTATATGGATCATTCTATAAAGCCTGCAGGTTGGAATAATTGGGGGAAACTTGAGAATGAAAAAAGTGCTTGCTTCTATGAATACAGGTGTTTCGGACCGGGTTTTTGTCCCTCGAAACGGGTGAAATGGGCTAGAGTGTTGACGAATAAAGAAGCTGAGGAGTTTCTCATGCATAGTTTCATTGATCCAGAACCACATAAACCTTGGCTTGCTCAAAGAATGGCCTTAAGGATTCCATTTTCTGCTTAG 951 0.4122 MAPFVLTVSQNGTGNYRTVQEAIDAVPLRNTRRTIIRISPGIYRQPLYVAKTKNFITFVGLCPEDTILTWNNTANKIDHQQSSKVIGNGTFGCGSTIVEGEDFIAENITFENFSPEGSGQAVAVRVSADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALMEHCHIHCKSAGFITAQSRKSPHEKTGYVFMRCAITGNGGSSYAYLGRPWGPFGRVVFAFTYMDHSIKPAGWNNWGKLENEKSACFYEYRCFGPGFCPSKRVKWARVLTNKEAEEFLMHSFIDPEPHKPWLAQRMALRIPFSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03620 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 298 - -
Mepo5g03620 316 SUPERFAMILY Pectin lyase-like 3 302 IPR011050 -
Mepo5g03620 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Mepo5g03620 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Mepo5g03620 316 FunFam Pectinesterase 2 309 - -
Mepo5g03620 316 Gene3D - 5 311 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03620 Mepo-Chr5 44771857 44776626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03620 5 309 Carbohydrate Esterase AT5G47500 38.801 7.77e-71 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03620 K01051 - gmx:100810259 568.155