Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03612 ATGGACGGATCAAATAGCAGTGTTGGAGGAAGTGTAGACATATGTCTAACAAATTATAAATTGGTGAAGACATTGTACAATTGGTCCTTTGGCAAGGTGAGGTTAGCAGAGCATGTAATGACTGGTGAAAAAGTTGCCATATATCTCATTGATTGCCGTTGGACAGAGAATACACAAATGGAAGAAAAAGTAAGAAGAGAAATTAATACTTTAAAATTGTTAAGGCATCCTCACATTATACAAGTTTATGAGGTGATAGAAACCCTAACAAATATATATGTTATTATGGAGTATATGGAATCTGGGGAGCTTTTTGATTATATAGTAGAAAAGGGTAGGTTGCACGAAGATGAAGCGCGCAAATTTTTTCAGCAGATAATCTCCGGGGTAGAGCATTGTCACAACAATATGGTGGCTCATAGAGACTTAAAGCCAGAAACTATACTTTTGGACTCAAAATTCAATGTCAAGATTACTGATTTTGGCTTGAGCAACACAATGCAACATAGTCAGTTACTTAAGACACGTTGTGGAAGTGTTAACTATGCAGCTCCTGAGGTTATCTCTGGGAAGTTATATGATGGATCCAAAGTAGATATTTGGAATTGTGGTACGTTACTGTATGCACTTCTATGCGGTGCTCTTCCTTTTGATGATGAAAATATTCCCACCCTCTACAAAAAAATAAAGGGTGGTATATACACTATTCCTAGTTATTTATCACCTGGTGCTAGTGATTTGATTACAAAGCTGCTTGAGGTGGATCCTATGAAGAGGATTACCATACTTGAAATACACCAGCACCCTTGGTTCCAAATTTCTCTGCCTCATTATTTGGCAATGCCATCACCACTAGATAAAGTGCAACAAGCCAAAAAGCTGGAGGAGGAGGAGGAGCTACGGCTTGATGGTCTAGATTGCAAAAATGTGTTGTTCTATATACTTTCGAGTCTAAGTTGGTTACTACCACAAAATCTTGCAAAGATTTTCTCTCGATGTTTGGATAAAATGTTTTATACATCAACTAGGTTTTTCTCAAGAGAGGATACTAATTTGCTAGAGTTTGAAAAGATTCACAATAGTGATAATGATTCAAACATGGTGACAAAGACTTTAGAAGGGAAAATTTGA 1131 0.3687 MDGSNSSVGGSVDICLTNYKLVKTLYNWSFGKVRLAEHVMTGEKVAIYLIDCRWTENTQMEEKVRREINTLKLLRHPHIIQVYEVIETLTNIYVIMEYMESGELFDYIVEKGRLHEDEARKFFQQIISGVEHCHNNMVAHRDLKPETILLDSKFNVKITDFGLSNTMQHSQLLKTRCGSVNYAAPEVISGKLYDGSKVDIWNCGTLLYALLCGALPFDDENIPTLYKKIKGGIYTIPSYLSPGASDLITKLLEVDPMKRITILEIHQHPWFQISLPHYLAMPSPLDKVQQAKKLEEEEELRLDGLDCKNVLFYILSSLSWLLPQNLAKIFSRCLDKMFYTSTRFFSREDTNLLEFEKIHNSDNDSNMVTKTLEGKI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03612 376 SUPERFAMILY Protein kinase-like (PK-like) 16 272 IPR011009 -
Mepo5g03612 376 Pfam Protein kinase domain 29 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03612 376 FunFam Non-specific serine/threonine protein kinase 5 100 - -
Mepo5g03612 376 FunFam Non-specific serine/threonine protein kinase 100 283 - -
Mepo5g03612 376 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 17 285 - -
Mepo5g03612 376 Gene3D Transferase(Phosphotransferase) domain 1 11 317 - -
Mepo5g03612 376 ProSiteProfiles Protein kinase domain profile. 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03612 Mepo-Chr5 44683595 44687766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03612 19 353 CBL-interacting serine-threonine protein kinases AT4G24400 43.023 2.47e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Mepo5g03612 Pkinase 1.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03612 K07198 - rcu:8283436 414.461