Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03611 ATGGATGGATCAGCTGGACCTGGTGGTGGAAATGTGAATGCATTTCTACGGAACTATAAAATGGGGAAAACACTTGGAATTGGCTCCTTTGGCAAAGTAAAAATTGCGGAGCATGTATTGACTGGGCACAAAGTTGCCATTAAGATTCTCAATCGCCGGAAGATAAAAAATATGGAAATGGAAGAAAAGGTGCGAAGAGAAATTAAGATTTTAAGATTGTTCATGCACCATCACATCATACGCCTTTATGAGGTTGTGGAAACCCCAACAGACATTTATGTTGTGATGGAGTATGTGAAATCCGGAGAGCTCTTTGATTACATTGTAGAAAAGGGCAGGCTACAAGAAGATGAAGCCCGCAGTTTTTTCCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTAGTTCATAGAGACTTGAAGCCTGAGAATTTACTTTTGGACTCAAAATGGAGTGTCAAAATTGCTGATTTTGGCCTGAGCAACATCATGCGTGATGGTCACTTTCTTAAGACAAGTTGTGGAAGCCCTAACTATGCAGCTCCCGAGGTTATCTCTGGGAAATTATATGCTGGACCTGAAGTAGATGTTTGGAGCTGTGGTGTAATTTTATATGCACTTCTCTGTGGCACTCTACCTTTTGATGATGAAAATATTCCCAACCTCTTCAAAAAAATAAAGGGTGGGATATATACTCTTCCTAGTCATCTATCTCCTGGTGCCAGAGATTTGATACCAAGGCTGCTTGTGGTGGATCCCATGAAAAGGATGACCATACCTGAGATACGCCAACACCCATGGTTCCAACTTCATCTGCCTCGATATTTGGCTGTGCCACCACCAGATACACTACAACAGGCCAAAAAGATTGACGAGGAGATTCTTCAGGAGGTGGTTAATAGGGGATTTGCTAGGGAACCATTGGTTGAGTCCCTTAAGAACAGGGTACAAAATGAGGGTACTGTGACTTACTATTTGTTATTGGACAACCGTTATCGTGTCTCCACTGGCTATCTCGGAGCTGAGTTTCAAGAGACAATGGATTCTGGTTTGAACCGTATCCACTCCGGTGAAGTTGCTTCTCCAGTCGTTGGACACCGCTTTCCAGGATATATGGATTACCAAGGAGTAGGAATGAGGCAACAGTTCCCTGCTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGAGCCCAGCCTCGTGAAATAATGACCGAGGTCCTTAAAGCTCTGCAAGAACTGAATGTCTGTTGGAAAAAAATTGGACCCTATAACATGAAGTGCAGATGGGCCGTCGGCACCCCTGGTCATCATGGAGGAAATGACAGCATTATTGAGAACGAAGTTGTTCCTAAGACAACTGTAGTCAAGTTTGAACTGCAGCTGTACAAAACTCAGGAGAAATATCTGCTTGATCTTCAAAGGCTTGAGGGACCCCAGTTTCTTTTCCTGGATCTCTGTGCTGCCTTCCTTGCGCAGCTTCGTGTCCTGTAG 1500 0.4413 MDGSAGPGGGNVNAFLRNYKMGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHHHIIRLYEVVETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARSFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWSVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRLLVVDPMKRMTIPEIRQHPWFQLHLPRYLAVPPPDTLQQAKKIDEEILQEVVNRGFAREPLVESLKNRVQNEGTVTYYLLLDNRYRVSTGYLGAEFQETMDSGLNRIHSGEVASPVVGHRFPGYMDYQGVGMRQQFPAERKWALGLQSRAQPREIMTEVLKALQELNVCWKKIGPYNMKCRWAVGTPGHHGGNDSIIENEVVPKTTVVKFELQLYKTQEKYLLDLQRLEGPQFLFLDLCAAFLAQLRVL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03611 499 FunFam Non-specific serine/threonine protein kinase 395 497 - -
Mepo5g03611 499 SMART serkin_6 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03611 499 SUPERFAMILY Protein kinase-like (PK-like) 16 272 IPR011009 -
Mepo5g03611 499 CDD AMPKA_C 389 496 - -
Mepo5g03611 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Mepo5g03611 499 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 292 332 IPR015940 -
Mepo5g03611 499 CDD STKc_AMPK_alpha 16 271 - -
Mepo5g03611 499 Gene3D Kinase associated domain 1, KA1 395 497 - -
Mepo5g03611 499 Pfam Protein kinase domain 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03611 499 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Mepo5g03611 499 CDD UBA_SnRK1_plant 293 333 - -
Mepo5g03611 499 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 17 314 - -
Mepo5g03611 499 FunFam Non-specific serine/threonine protein kinase 10 349 - -
Mepo5g03611 499 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 451 498 IPR001772 -
Mepo5g03611 499 ProSiteProfiles Protein kinase domain profile. 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03611 499 Pfam Kinase associated domain 1 456 498 IPR001772 -
Mepo5g03611 499 SUPERFAMILY KA1-like 328 498 IPR028375 -
Mepo5g03611 499 Gene3D Transferase(Phosphotransferase) domain 1 10 350 - -
Mepo5g03611 499 FunFam Non-specific serine/threonine protein kinase 9 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03611 Mepo-Chr5 44673068 44681364 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03611 19 271 CBL-interacting serine-threonine protein kinases AT4G24400 51.575 5.23e-91 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Mepo5g03611 Pkinase 1.9e-79 CL0016