Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03610 ATGGGTTGCATTGGTTCCAAACATGCTGTGGCGGGGAATATTTCTCCGGCACCGACCGTCGGAGAAATTGTAGAGGTTGTTCCTTCTTCAAAGGCTCATTCTGGTTTGGTGGTTTTGGATTCTAATTCTAAATCATCATCACATGAAAATAAGAATAGCAAGTTAAAGAAAAATAACTCAAAAAAAAGTAGTGGCTCATTCAGCTTTAGAATTGGTTTTTCACAAAGATATGTTGAAGCTGAACAAAATGCTGCTGGTTGGCCTCCTTGGCTTACAGCTTCTGCAGCTGAAGCTGTTCAAGGTTGGATCCCTCTCAAAGCTGATGCTTATCAAAAGTTAGATAAGATTGGACAAGGTACATATAGCAGTGTTTTCCGAGCACGTGAAGTTGAAACTGGAAAAATGTTTGCTCTAAAAAAAGTGCGGTTTGACACTTTCCAAGCCGAGAGCATAAGGTTCATGGCAAGAGAAATAACAATTCTAAGGAGGCTTGACCATCCAAACATAATGAAGTTGGAAGGAATAATCACTTCTCGAATGTCAAATAGCATATACCTTGTGTTTGAATACATGGAACATGATCTTGCTGGCCTTGTTTCTCGTTCTGACATTGTTTTCACCGACTCACAGATAAAATGCTACATGAGGCAACTATTAAGCGGACTTGAGCATTGTCATGTACGTGGAATCATGCATAGAGACATTAAAGTATCAAATATCTTGTTGAACAATGAAGGTGTTCTTAAGATAGCTGATTTTGGATTGGCAAACTCAATTAGTCCTAACAATAAGCATCCTTTAACAAGTCGTGTAGTAACTCTATGGTATCGTCCTCCTGAGCTCTTGATGGGAGCAACTAACTACGGAGTATCAGTTGATCTTTGGAGTGTCGGATGTGTATTTGCCGAACTTTTTCTTGGGAAGCCTATTCTTAAGGGGAGAACTGAGGTTGAACAATTACACAAAATTTTCAAACTGTGTGGTTCTCCACCTGAGGAGTTCTGGAAAAAGACCAAGCTACCTCATGCAACAATGTTCAAACCTCAGACTAACTACGAAAACTCTCTTCGAGAGAGGTGTGTTGATTTTCCTGAATCGACCATAGGTTTACTCGAGACTTTACTGTCTATTGATCCTAGCAAGCGTGGAACCGCCTCCTCGGCTCTAATATCTGAGTACTTCAACACTAAGCCATTTGCTTGTAATCCATCAAATCTGCCAAAGTATACACCTAGCAAAGAAATGGATGCTAAAGGTCATGAAGATACATCCAGGAAAAAGACCGGCGATAAAATGCGAGAGGCTGCGACATCTAGAAGGCAACAAAGACGGGTCTCTAAAGCTTTCCATGACCACAACAATTTTGTTAAATCAACTTCAAAAGAGAATATTTCTCAAAATGCTAGAAAAGATGACGGTAAACCAAATCTTCCAAAGGGAAAAGGAGATACTATGCACAAAGATCACTCAAAGACTTCAATGGATGCAATGTTAGAGACTTCTCAAAGGTTGAATGTTGCTGATGGTAATGGCTATAGTGTACCAGTAAAAGTCAAAGGAATGTCAAATGATTTTTCATGGTCAAAAAGAAGAAAACAAGATGCATCATCAACACTATCAGATGGATCAAGAAGTAAAATTAGTGCATTGGATCCTAACTTTGCAAAAGGAACATATGATTTACCTAATCAAAGGGTTTCCATGGATTTTGATCCTAAGGAACTAATGAATGCACAGGCCCAACAAGAAGAAAAAGGTGCATATTGGAATGACGGAATGCGGCATGCAGCTCGTAAATCAAGGTTTGGAAGAGATATATGA 1821 0.3937 MGCIGSKHAVAGNISPAPTVGEIVEVVPSSKAHSGLVVLDSNSKSSSHENKNSKLKKNNSKKSSGSFSFRIGFSQRYVEAEQNAAGWPPWLTASAAEAVQGWIPLKADAYQKLDKIGQGTYSSVFRAREVETGKMFALKKVRFDTFQAESIRFMAREITILRRLDHPNIMKLEGIITSRMSNSIYLVFEYMEHDLAGLVSRSDIVFTDSQIKCYMRQLLSGLEHCHVRGIMHRDIKVSNILLNNEGVLKIADFGLANSISPNNKHPLTSRVVTLWYRPPELLMGATNYGVSVDLWSVGCVFAELFLGKPILKGRTEVEQLHKIFKLCGSPPEEFWKKTKLPHATMFKPQTNYENSLRERCVDFPESTIGLLETLLSIDPSKRGTASSALISEYFNTKPFACNPSNLPKYTPSKEMDAKGHEDTSRKKTGDKMREAATSRRQQRRVSKAFHDHNNFVKSTSKENISQNARKDDGKPNLPKGKGDTMHKDHSKTSMDAMLETSQRLNVADGNGYSVPVKVKGMSNDFSWSKRRKQDASSTLSDGSRSKISALDPNFAKGTYDLPNQRVSMDFDPKELMNAQAQQEEKGAYWNDGMRHAARKSRFGRDI 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03610 606 FunFam probable serine/threonine-protein kinase At1g54610 193 434 - -
Mepo5g03610 606 SMART serkin_6 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03610 606 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Mepo5g03610 606 Gene3D Phosphorylase Kinase; domain 1 97 192 - -
Mepo5g03610 606 ProSiteProfiles Protein kinase domain profile. 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03610 606 FunFam probable serine/threonine-protein kinase At1g54610 97 192 - -
Mepo5g03610 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Mepo5g03610 606 MobiDBLite consensus disorder prediction 464 490 - -
Mepo5g03610 606 SUPERFAMILY Protein kinase-like (PK-like) 105 399 IPR011009 -
Mepo5g03610 606 MobiDBLite consensus disorder prediction 413 441 - -
Mepo5g03610 606 MobiDBLite consensus disorder prediction 404 490 - -
Mepo5g03610 606 CDD STKc_CDK9_like 110 394 - -
Mepo5g03610 606 MobiDBLite consensus disorder prediction 38 65 - -
Mepo5g03610 606 Gene3D Transferase(Phosphotransferase) domain 1 193 434 - -
Mepo5g03610 606 Pfam Protein kinase domain 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03610 606 PANTHER CELL DIVISION PROTEIN KINASE 108 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03610 Mepo-Chr5 44657021 44662517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03610 102 441 Core Cell Cycle Gene Families AT5G10270 46.910 1.63e-108 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo5g03610 Pkinase 2.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03610 - - gmx:100790917 906.746