Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03606 ATGTCTTCATCTACGCAGAAAGAAAAATGCAACAATGGTGATTCTACTGAGAAAGGGTTGAAAAAAGGTCAATGGTCAAAAGAAGAGGATGAAATATTAAAAGCATACATGACTAAAATTGAACAGAAAAATTGGAATTGGGATTCAGTATCAACAAATGCAGGGCTTAGTAGAGATGGTAAAAGTTGTCGTTTGAGATGGCTCAATCATCTACACCCAGATGTGAAAAAGGGTCCATTCAGCGAAGAAGAAGAAAGAAGAGTGTTTGAGTTACGTACTGAGCTTGGTGGATTCAAATGGAGTGAAATGGCACTCCAGTTACCAGGAAGATCAGATAATGCCATCAAGAACTATTGGAATGCAAGAAAAAGAAAATATGAAAAGCTTGGCCTATCACCCTTCCCTCAAAACATAAAACATGATGATGTGTTGAACGAAAACAACCCTCATCAACTTCCAACCGTATTTGATGTCCCAAATAAGAAGCTTCGAAAGTTTGTTGATGATTCAAATATGGGCAATGGAACTTCTCATACACCTATGACTATGACTATGGTATCAGATCTGCCTTCACTCCCAAAGTGTTCATACTTTCAAACTATGGACTATCCATCTTCTTCACACATGATGCTTAATGAGTATTCACAAATTCTATCACCTAAAGAAACTCAATATCAGATGTTAGAATCAATTTCTCCAGACAATGATGGTTTATTGGAGTCCATATTTAATACACCAAAGAGTTGGGAAGGCTCATATGGTACTCCCATGTGTCCTTCTGAGATAAATTTGGTTGATGAAAGAGGTAAAAAACCAATTTCTCTGGAAAATGATGTTGAAGGAAACCATGGTGACTTAATGGATGCAGATTTTTGGTTTGACTACTTTTTATACGACAATGACGACAACAATAACATGCTTGAGAGGCTTCCAAACAATGTGAAGGATACCTTAGACGCAGTTATATATGGAAAAAGCTTCCATAAGTGA 990 0.3687 MSSSTQKEKCNNGDSTEKGLKKGQWSKEEDEILKAYMTKIEQKNWNWDSVSTNAGLSRDGKSCRLRWLNHLHPDVKKGPFSEEEERRVFELRTELGGFKWSEMALQLPGRSDNAIKNYWNARKRKYEKLGLSPFPQNIKHDDVLNENNPHQLPTVFDVPNKKLRKFVDDSNMGNGTSHTPMTMTMVSDLPSLPKCSYFQTMDYPSSSHMMLNEYSQILSPKETQYQMLESISPDNDGLLESIFNTPKSWEGSYGTPMCPSEINLVDERGKKPISLENDVEGNHGDLMDADFWFDYFLYDNDDNNNMLERLPNNVKDTLDAVIYGKSFHK 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03606 329 ProSiteProfiles Myb-like domain profile. 17 71 IPR001005 -
Mepo5g03606 329 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 8 160 - -
Mepo5g03606 329 SMART sant 21 73 IPR001005 -
Mepo5g03606 329 SMART sant 76 125 IPR001005 -
Mepo5g03606 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 127 IPR017930 -
Mepo5g03606 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 71 IPR017930 -
Mepo5g03606 329 CDD SANT 25 71 IPR001005 -
Mepo5g03606 329 Gene3D - 79 142 - -
Mepo5g03606 329 ProSiteProfiles Myb-like domain profile. 72 123 IPR001005 -
Mepo5g03606 329 MobiDBLite consensus disorder prediction 11 25 - -
Mepo5g03606 329 Pfam Myb-like DNA-binding domain 25 87 - -
Mepo5g03606 329 CDD SANT 79 120 IPR001005 -
Mepo5g03606 329 MobiDBLite consensus disorder prediction 1 25 - -
Mepo5g03606 329 Gene3D - 21 76 - -
Mepo5g03606 329 SUPERFAMILY Homeodomain-like 19 119 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03606 Mepo-Chr5 44617654 44619062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03606 1 139 MYB Transcription Factor Family AT2G26960 48.201 2.65e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo5g03606 Myb_DNA-bind_6 3.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03606 K09422 - cam:101496052 249.98