Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03562 ATGTATGAGCACAAGTTTATTGAGAAGATTGTTGAACAAGTCTTAAGAAATACAAAACCAACTATCTTGCATGTTGGTGATTACCTCGTTGGACTGGAGCACCAAAAGCAACACGTGAATTCGCTTTTGAATGTTGGGCTTGATGATACAATCCACATGGTTGGGATCCATGGGATTGGTGGAATAGGGAAAACTACCCTTGCTCTAGAAGTTTATAATTCAATCGTCAATCAATTTCAATGTCATTGTCATTTTGTAAAAGTCAGAGAAAATTCAGACGAAAATGCTTTGATAAATCTCCAAAAGATCCTTCTGTCCAAAGTTTTTGGAGATAAAAACACAGAGATAACAAGTGTTAGAGAAGGAATTTCAATATTGCAGAAAAGGCTTCCACAAAAGAAGGTTCTTTTACTTCTAGACGATGTTGACAATGAGGAGCAATTAAAGACTATTGCTGGAAGTACCGATTGGTTTGGTCAGGGCAGTAGAGTCATCATCACGACTCGAAACAAAAGTTTGCTAATATGTCATGGGATTGAAAAAACATACGAGATGAAGGGATTGGATGATGAAGATGCTTTTGACTTGGTGGGATGGAAAGCATTAAAAAACAAATATAGTCCAAGCTATAAAGATGTTTTATTAGAACAAAAGCATGGAAGAGAATTGAATGTGATCGAATTGCATAGACTGAAAAATTTGAAGAATGACGAAGGTTTATCAAGTTATGCGAATGTCTTAAAACGTGCCGTAACACATGCTTCTGGCCTTCCACTTGCTCTGGAAGTCATAGGTTCTCAATTTTTTAACAAGACAATAGAAGAATGTAAAGATGCACTTGCTCGTTATGAAAGAGTTCCTCATAACACGATCCAAACAACACTAGAAACGAGCTATTATGCTTTGCAAAACGAAGATAAAGCTGTTTTTCTTGACATTGCTTGTTGTTTCCAAGGATATGAATTGGCAAAGGTCAAACAAATACTTCATGCTCATCATGGGAATATCATGAATGATCACATTACGGTGCTAGTAGAAAGATCTCTCATAAAAATAAATGAGTCTGGTAGAGTGACATTACATGATTTTGTAGAGGATATGGGTAAAGAAATTGTTAGAAGAGAGTCACCTGAATATCCTGGAAAGCGTAGTAGGTTATGGTCTTCTGAAGATATAATTAAAGTTTTACAAAAAAATACGGGAACAAGTAAAATTGAAATCATACATTTCGACTCTTGGATTGAAGTAAAATGGGATGGACAAGCTTTCAAGAAGATGAAAAATCTCAAAACTCTAATTTTTAGTAACGATGTTTGTTTTTCTAAACATCCCAAACATCTTCCAAATAGTCTAAGAGAGTTACAGAATATGAGAGTTTTAAATCTTTATTATCCATATGATAGAGGTTTAGAAGAAATACCTGATATATCTAGTCTCCCAAATTTAGAAGAATTTTCAATTCAAGAATGTGACGAACTAATTACAATTGATAATTCATTTGGTTTTTTTGTGGGGGGTGGGTTGTTGGATAAACTTAAATTCATCAATATGGAATACTGCATCTTGCTTAGGAGTATCCCACAACTTAGGTTGACTTCGTTAGAACATTTCAATCTTTCATGTTGTTATAGTCTTGAGAGTTTTCCTGAAATATTGGGAGAGATGAGAAACATACCAGGACTCCTCTTGGATGAAACTTCCATTAATGAGTTGCCATTTCCATGTCACAATCTTACTCAGCCTCAAACATTTCATCCATGTGAGTGTGAATATATTAGGCAGTGGCAAGATTATAGTTATACACCTGGTGTTCAACTTACCATCCTGAATGAAGAAAAAGTGATCCCAATACAATCTTCGAATGTAAAGTATATTTGTGTCAGGAACATCAAACTTTCAGATGAATTATTGTCAAAAACTCTTATGTTGTTTGCCAATGTGAAAGAATTACACCTAGCTGACAATCAACTCACAATTATTCCTAAATCTATAGAAAACTGTCATTTTTTATGGAAACTTCTCTTGGATAATTCTAAGAAACTTCAGGAAATCAAAGGGATTCCTCCATGCCTAAGAGAGTTATCTGCACTAAACTGCATGTCATTGACTTCGTCATGCAAAAGCAAATTACTAAATCAGAAATTACACGAGGCTGGAAAGACTCGGTTTCGTTTGCCACGGGCAAAGATTCCAGAGTGGTTCGACCACCAATACGAGGCAGGAATGTCAATTTCTTTCTGGTTTTGTGGCAAGTTTCCTGCCATAGCTCTCTATTTTGTTTCTCCACGTACATGGGGTGATTCTGAACATTCTGCCAGAGTGATCATCAACGGGAATACACTTTTCTATAAATATGGTTTGAAAACTGTTGACCAATCACGTCCTCCGGACACATATCACTTGCATCTTTTTCATATGCAAGCGAAAATAAATGTTAATTTGGACAAAGCACTTTTAGAAAGTAAATGGAACCATGCAGAGGTTGACTTTGGATTCCCATTCCAGAAAAGTGGAATCCATGTATTGAAAGAGAAAAGTAACATGAAGGATATTCGATTCACCAACCCAGAGAATGATGCTAACATTGTATTCACTCAGGATGAAGCCATGCTACCAGAGCCCTTTAACTTGTCAACAGAACTGTCATCAACTTCCGATGAAATTGAACCGTTGCCGCACAACTTACATTTGAGTTCATGTTCTAAACGACACTTTTCTGATAAGAGTGTTGCTAACCAGACTGAGCAAATTCAGTGCTTGTCATCATCTAAAAACTTCCTAGACAACCAAGAAAGTGATGCACATGGAGAAGCTGAAGAGCAGATTGAGATTTTGGAAAAGATTGTGCCAAACTGGCTTTGCAAGAAGGTGGTTTCTTCTGGAGACACTATGTACTGCGTTAAGAATGTGTTGGATTTGGACTCGGTTCGATCAAGGCTTCTCAACAGTGTGCGCAAAGGAGATGAGTGA 2970 0.3657 MYEHKFIEKIVEQVLRNTKPTILHVGDYLVGLEHQKQHVNSLLNVGLDDTIHMVGIHGIGGIGKTTLALEVYNSIVNQFQCHCHFVKVRENSDENALINLQKILLSKVFGDKNTEITSVREGISILQKRLPQKKVLLLLDDVDNEEQLKTIAGSTDWFGQGSRVIITTRNKSLLICHGIEKTYEMKGLDDEDAFDLVGWKALKNKYSPSYKDVLLEQKHGRELNVIELHRLKNLKNDEGLSSYANVLKRAVTHASGLPLALEVIGSQFFNKTIEECKDALARYERVPHNTIQTTLETSYYALQNEDKAVFLDIACCFQGYELAKVKQILHAHHGNIMNDHITVLVERSLIKINESGRVTLHDFVEDMGKEIVRRESPEYPGKRSRLWSSEDIIKVLQKNTGTSKIEIIHFDSWIEVKWDGQAFKKMKNLKTLIFSNDVCFSKHPKHLPNSLRELQNMRVLNLYYPYDRGLEEIPDISSLPNLEEFSIQECDELITIDNSFGFFVGGGLLDKLKFINMEYCILLRSIPQLRLTSLEHFNLSCCYSLESFPEILGEMRNIPGLLLDETSINELPFPCHNLTQPQTFHPCECEYIRQWQDYSYTPGVQLTILNEEKVIPIQSSNVKYICVRNIKLSDELLSKTLMLFANVKELHLADNQLTIIPKSIENCHFLWKLLLDNSKKLQEIKGIPPCLRELSALNCMSLTSSCKSKLLNQKLHEAGKTRFRLPRAKIPEWFDHQYEAGMSISFWFCGKFPAIALYFVSPRTWGDSEHSARVIINGNTLFYKYGLKTVDQSRPPDTYHLHLFHMQAKINVNLDKALLESKWNHAEVDFGFPFQKSGIHVLKEKSNMKDIRFTNPENDANIVFTQDEAMLPEPFNLSTELSSTSDEIEPLPHNLHLSSCSKRHFSDKSVANQTEQIQCLSSSKNFLDNQESDAHGEAEEQIEILEKIVPNWLCKKVVSSGDTMYCVKNVLDLDSVRSRLLNSVRKGDE 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03562 989 Gene3D Ribonuclease Inhibitor 392 559 IPR032675 -
Mepo5g03562 989 SUPERFAMILY "Winged helix" DNA-binding domain 290 397 IPR036390 -
Mepo5g03562 989 Gene3D Ribonuclease Inhibitor 595 720 IPR032675 -
Mepo5g03562 989 Gene3D - 900 987 IPR038090 -
Mepo5g03562 989 Pfam NB-ARC domain 37 292 IPR002182 GO:0043531
Mepo5g03562 989 SUPERFAMILY L domain-like 359 708 - -
Mepo5g03562 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 229 313 IPR027417 -
Mepo5g03562 989 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 705 IPR044974 GO:0006952
Mepo5g03562 989 PRINTS Disease resistance protein signature 254 268 - -
Mepo5g03562 989 PRINTS Disease resistance protein signature 53 68 - -
Mepo5g03562 989 PRINTS Disease resistance protein signature 129 143 - -
Mepo5g03562 989 PRINTS Disease resistance protein signature 529 545 - -
Mepo5g03562 989 Gene3D - 7 180 IPR027417 -
Mepo5g03562 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 214 IPR027417 -
Mepo5g03562 989 Gene3D - 227 303 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03562 Mepo-Chr5 44152009 44157986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03562 3 578 WRKY Transcription Factor Family AT4G12020 28.370 1.52e-46 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03562 - - mtr:25488454 735.332