Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03540 ATGTTTTCATCTTCAATTTTCATCAAATGGAGTTTCTTTCTTCTCTTCTTATCTTCTTCAAACGACGCCGTTTCATCATTTTCCGATAAATCAACTCTCCTCCGCTTCAAAGCCTCCCTCTCCGACCCATCCGCCGTTCTCTCCACCTGGAGCTCTACTGCCAACCACTGTTCCTTCCACGGAGTTCTCTGTGATTCCAACTCCCGTGTTGTTGCTCTCAATATCACCGGCAACGGCGGTGTCGAATACGGTAAACTGATTTCACATCCTTGCTCTGATTTTAATAAGTTTCCGCTTTATGGGTTTGGAATTAGGATAAGTTGTGTTGGTTTTAAGGGTTCTTTGTTTGGAAAGTTACCATCTTTGATCAGTGAGTTAACTGAGCTTAGGGTTTTGAGTTTACCCTTTAATGGGTTGGAGGGTTTTATTCCTAAAGAGATTTGGAATATGGAGAAACTTGAGGTTCTTGATTTAGAAGGTAATTTGATTAGTGGGTCTATTCCTTTGAGTTTTGAAGGTTTGAGGAAATTGAGGGTTTTGAATTTAGGGTTTAATAAGATTGTTGGAATGGTGCCTAGTGTTTTAGGTGATATTGATAGCTTGGAGGTTCTGAATTTGGCTGCAAATGGTTTGAATGGTTCTGTTCCTGGTTTTGTTGGGAAGTTTAGAGGGGTGTATTTGTCTTTTAATCAGTTTAGCGGTGTTATTCCGGAGGAGATTGGTGAGAATTGTGGGAAGCTTGAGCATTTGGATTTGTCTGGTAATTTGTTGGTTCAAAAGATTCCGAAGAGTTTGGGGAATTGTGGTGGGTTGGAGACGCTTTTGTTGTATTCAAATCTGTTGGAAGAGGATATTCCTTCTGAATTTGGGAAGCTTAAGAGTCTTGAGGTGTTGGATGTTTCGAGGAATACGCTTAGTGGTCGTATTCCTCGCGAGCTTGGGAATTGTACGGAGCTTTCTGTTGTTGTGCTTTCCAATCTTTTTGATCCGGTTGGGGATGTTGAGTTTGTTTCTTTGAATGATGAATTGAATTATTTTGAAGGTTCAATGCCTGAAGAAGTTGTGTCACTTCCTAAGCTTAGGATTTTGTGGGCTCCCATGGTGAATTTGGAGGGAGGTTTTCCTACGAGTTGGGGTGCTTGTGGTAACTTGGAGATGGTTAATTTGGCTCAGAATTTCTTCACTGGAGTGTTCCCGAACCAGCTCGGTTTATGTAAGAAGTTGCATTTTCTTGATCTGAGCTCAAACAATCTTACTGGGGAGCTTTCTGAGGAACTTCATGTTCCATGTATGACTGTGTTTGATGTTAGCGTGAATATGTTGTCTGGTTCGGTTCCTGTTTTTTCCTACAATGGTTGCTCTCCGTTTCCTTTATGGAATGGTAATCCATTTGAATCTCTCAATGTTACGTCTCCTTATGCATCATATTTTTCATCAAAAGTTCGTGAGAGATCACTTTTCACATCGTTAGGGGGAGTTGGCATTTCAGTCTTTCACAACTTCGGGCAAAACAACTTCACCGGCATTCAGTCGTTGCCAATAGCACGAGACAGGATGCAAGAAAAGAGTGGCTACACACTTCTTGTCGGAGAGAACAAACTCACGGGACTATTTCCTACACATTTACTTGAGAAATGTGATGGATTAGATGCATTGCTTTTGAATGTCAGTTATAATAGGTTTTCTGGTGAGTTTCCTTCTAATATTAGTAAAATGTGCAGATCACTGAATTTTTTGGATGCATCTGGAAATCAAATTTCAGGACCCATTCCACCTGCTTTAGGGGATTCAACCTCTCTAGTTTCCCTGAACCTCAGTAGGAACCTATTGCTAGGTCAAATTCCCTCCAGCCTCGGACAGATGAAGGATCTGAAGTTTCTATCTTTGGCTGGTAATAAATTGAGTGGCTCAATTCCTTCCAATCTGGGTCAGTTGTATTCTTTACAAGTCTTGGACCTTTCAACAAACTCTCTTACCGGTGAGATTCCTAAGTTTATTGAGAACATGAGAAATCTGACCGTTGTTCTGCTGAATAACAACAACCTTTCTGGACACATTCCAGCTGGTTTAGCAAATGTAACTACACTCTCTGTATTCAATGTGTCTTTCAATAACTTATCTGGATTCTTGCCATCAAATAGTAGCTTGATCAAATGCAGCAGTGCTGTTGGGAATCCATTTCTAAGCTCCTGCCGTGGCGTTTCTCTGACTGTGCCATCGGCAAATCAACAAGGGCAATTGGATGACAATTCTTCCATGACTGCAGAAGATAATGAAAAAAATAGTGATAATGGTTTCAGCGCTATTGAGATAGCATCTATAGCTTCTGCTTCGGCCATTGTCTCTGTTCTTATAGCCCTCATTGTTCTGTTCTTCTTCACGCGAAGGTGGAAGCCAAATTCCAGGGTTGGCGGTTCTACCAAAAGAGAAGTTACAGTGTTTACTGATATCGGTGTCCCTTTGACATTTGAAAATGTTGTCCAAGCCACAGGAAATTTCAATGCAAGCAACTGTATTGGGAGTGGAGGATTCGGAGCAACTTATAAGGCAGAGATATCGCAAGGAATCTTGGTGGCAGTGAAACGTCTTTCAGTTGGACGTTTCCAAGGTGTTCAACAGTTCCATGCAGAGATTAAGACCCTTGGAAGGCTTCATCATCCAAACCTCGTCACTCTGATTGGTTACCATGCTTGTGAGACAGAGATGTTTCTCATATACAATTATCTTCCGGGTGGTAATCTTGAAAAGTTCATCCAGGAGAGATCCACAAGGGCCGTGGATTGGAAAGTTCTTCACAAGATTGCATTGGACATAGCGCGTGCACTTTCCTATCTGCATGATCAATGTGTGCCCCGTGTTCTTCATCGCGATGTCAAGCCTAGCAATATCTTGTTGGATGACGATTTGAATGCTTATCTATCCGACTTTGGACTGGCCAGACTTCTAGGAACTTCGGAGACACATGCTACAACCGGTGTGGCAGGAACATTCGGTTATGTTGCTCCTGAATACGCCATGACGTGCCGTGTTTCCGATAAGGCTGATGTGTATAGTTATGGTGTGGTGCTTCTTGAGTTACTCTCAGATAAGAAGGCATTGGACCCTTCATTTTCTTCTTACGGAAATGGTTTCAATATAGTAGCATGGGGATGCATGCTCCTGAGGGAAGGAAGGGCAAAGGAGTTCTTCGCGGCAGGGTTATGGGATGTTGGACCAGAACATGATTTGGTAGAGGTTTTACATTTAGCTGTTGTTTGTACTGTTGACTCACTATCAACAAGACCTACAATGAAACAGGTTGTGAAAAGACTAAAACAACTTCAACCTCCACCATGCTAG 3339 0.4208 MFSSSIFIKWSFFLLFLSSSNDAVSSFSDKSTLLRFKASLSDPSAVLSTWSSTANHCSFHGVLCDSNSRVVALNITGNGGVEYGKLISHPCSDFNKFPLYGFGIRISCVGFKGSLFGKLPSLISELTELRVLSLPFNGLEGFIPKEIWNMEKLEVLDLEGNLISGSIPLSFEGLRKLRVLNLGFNKIVGMVPSVLGDIDSLEVLNLAANGLNGSVPGFVGKFRGVYLSFNQFSGVIPEEIGENCGKLEHLDLSGNLLVQKIPKSLGNCGGLETLLLYSNLLEEDIPSEFGKLKSLEVLDVSRNTLSGRIPRELGNCTELSVVVLSNLFDPVGDVEFVSLNDELNYFEGSMPEEVVSLPKLRILWAPMVNLEGGFPTSWGACGNLEMVNLAQNFFTGVFPNQLGLCKKLHFLDLSSNNLTGELSEELHVPCMTVFDVSVNMLSGSVPVFSYNGCSPFPLWNGNPFESLNVTSPYASYFSSKVRERSLFTSLGGVGISVFHNFGQNNFTGIQSLPIARDRMQEKSGYTLLVGENKLTGLFPTHLLEKCDGLDALLLNVSYNRFSGEFPSNISKMCRSLNFLDASGNQISGPIPPALGDSTSLVSLNLSRNLLLGQIPSSLGQMKDLKFLSLAGNKLSGSIPSNLGQLYSLQVLDLSTNSLTGEIPKFIENMRNLTVVLLNNNNLSGHIPAGLANVTTLSVFNVSFNNLSGFLPSNSSLIKCSSAVGNPFLSSCRGVSLTVPSANQQGQLDDNSSMTAEDNEKNSDNGFSAIEIASIASASAIVSVLIALIVLFFFTRRWKPNSRVGGSTKREVTVFTDIGVPLTFENVVQATGNFNASNCIGSGGFGATYKAEISQGILVAVKRLSVGRFQGVQQFHAEIKTLGRLHHPNLVTLIGYHACETEMFLIYNYLPGGNLEKFIQERSTRAVDWKVLHKIALDIARALSYLHDQCVPRVLHRDVKPSNILLDDDLNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLREGRAKEFFAAGLWDVGPEHDLVEVLHLAVVCTVDSLSTRPTMKQVVKRLKQLQPPPC 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03540 1112 Gene3D Ribonuclease Inhibitor 329 455 IPR032675 -
Mepo5g03540 1112 ProSiteProfiles Protein kinase domain profile. 833 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03540 1112 SMART LRR_sd22_2 174 200 - -
Mepo5g03540 1112 SMART LRR_sd22_2 621 644 - -
Mepo5g03540 1112 SMART LRR_sd22_2 645 671 - -
Mepo5g03540 1112 SMART LRR_sd22_2 405 428 - -
Mepo5g03540 1112 SMART LRR_sd22_2 126 147 - -
Mepo5g03540 1112 SMART LRR_sd22_2 150 171 - -
Mepo5g03540 1112 SUPERFAMILY L domain-like 523 712 - -
Mepo5g03540 1112 ProSitePatterns Serine/Threonine protein kinases active-site signature. 953 965 IPR008271 GO:0004672|GO:0006468
Mepo5g03540 1112 CDD STKc_IRAK 839 1107 - -
Mepo5g03540 1112 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Mepo5g03540 1112 ProSitePatterns Protein kinases ATP-binding region signature. 839 861 IPR017441 GO:0005524
Mepo5g03540 1112 Pfam Leucine Rich Repeat 152 174 IPR001611 GO:0005515
Mepo5g03540 1112 Pfam Leucine Rich Repeat 246 268 IPR001611 GO:0005515
Mepo5g03540 1112 Gene3D Ribonuclease Inhibitor 223 328 IPR032675 -
Mepo5g03540 1112 SMART serkin_6 833 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03540 1112 Gene3D Transferase(Phosphotransferase) domain 1 909 1108 - -
Mepo5g03540 1112 Gene3D Ribonuclease Inhibitor 26 222 IPR032675 -
Mepo5g03540 1112 SUPERFAMILY RNI-like 116 448 - -
Mepo5g03540 1112 Gene3D Ribonuclease Inhibitor 477 780 IPR032675 -
Mepo5g03540 1112 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 615 710 - -
Mepo5g03540 1112 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 909 1112 - -
Mepo5g03540 1112 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 339 1106 - -
Mepo5g03540 1112 SMART LRR_typ_2 244 268 IPR003591 -
Mepo5g03540 1112 SMART LRR_typ_2 669 692 IPR003591 -
Mepo5g03540 1112 SMART LRR_typ_2 292 316 IPR003591 -
Mepo5g03540 1112 SMART LRR_typ_2 150 173 IPR003591 -
Mepo5g03540 1112 SMART LRR_typ_2 621 645 IPR003591 -
Mepo5g03540 1112 SMART LRR_typ_2 174 197 IPR003591 -
Mepo5g03540 1112 PRINTS Leucine-rich repeat signature 408 421 - -
Mepo5g03540 1112 PRINTS Leucine-rich repeat signature 645 658 - -
Mepo5g03540 1112 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 222 332 - -
Mepo5g03540 1112 MobiDBLite consensus disorder prediction 741 761 - -
Mepo5g03540 1112 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 797 908 - -
Mepo5g03540 1112 Gene3D Phosphorylase Kinase; domain 1 797 908 - -
Mepo5g03540 1112 Pfam Protein kinase domain 836 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03540 1112 SUPERFAMILY Protein kinase-like (PK-like) 813 1105 IPR011009 -
Mepo5g03540 1112 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 335 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03540 Mepo-Chr5 43843642 43847341 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03540 28 1112 Receptor kinase-like Gene Family AT3G02130 63.342 0.0 1320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Mepo5g03540 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03540 - - gmx:100819882 1649.8