Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03530 ATGATTAACATTCCAAAAGAAGCCGAATTTCCATTAAAACAAGAAGTTCTTCCATCAAATGATTCAACTACATCATCATCAACAACGTCGCAATGGTTAAAACTAAAAGATCCAAGAATTGTGAGGGTGTCTAGAGCCTTTGGAACAAAAGATAGACATAGCAAAGTATACACAATAAAAGGACTAAGAGATAGAAGGGTAAGGCTTTCAATCCAAACAGCAATTCACCTCTATGATCTTCAAGATAGGTTAGGGCTAAACCAACCTAGCAAGGTTGTTGATTGGTTGCTTAATATAGCTAAGGATGAAATTGATGAGCTTCCACCACTTCCAATACCTCAAGGAAACTTCACCTTAGGTTATCCATCTTTTGCTAGTACTATTTCTAATGGTGATGTTAGGCAAAACAACACTTCAATTTGGAAATCAAATTCTAAACAAGGGTTGGGAGATATTGTTACTAACAAAGAAAATTGGATGAATAGAAGTGAAGAGGATAAAGAGAAGAAAGAGGAGAATGATAATCGTGATTGTGCACAACATGATTCGCCAAATAGTCTATTACCACATTTAGTATCTGACAATGTCTCAAATATGATTATCTCTCGAGGAGCAAATCAACCTTCTTTTTTGGGAATGTTGAACACCATGCCACTTGGTTATCAATTGGAGCCTTCATCTAGTCATGTTCCTCAATTATCTAATTTTGGATTTGTTAACCAAATTAAAGATATAGATGGAAATAATGGAATGCATGTTGTACCCTTCCCATCATCATTGTGTTTGTCAACACAACAATATTTTCCTTCACATGTTGGAGCAGTGGAGATGGATCCAACACAAATCAATTACCATTATGATCAAATGTTGAGTTCAAGTTCTCAAAACGATTCTTTCAATCCAACTCAACAACTCATGAGGGTGACTCCTAAAATTTTTCATTCTCTCAACAACAGTGAAAGTTATTCCCATAAAGACCAAGATTTTCCTTCCAAGTGA 999 0.3544 MINIPKEAEFPLKQEVLPSNDSTTSSSTTSQWLKLKDPRIVRVSRAFGTKDRHSKVYTIKGLRDRRVRLSIQTAIHLYDLQDRLGLNQPSKVVDWLLNIAKDEIDELPPLPIPQGNFTLGYPSFASTISNGDVRQNNTSIWKSNSKQGLGDIVTNKENWMNRSEEDKEKKEENDNRDCAQHDSPNSLLPHLVSDNVSNMIISRGANQPSFLGMLNTMPLGYQLEPSSSHVPQLSNFGFVNQIKDIDGNNGMHVVPFPSSLCLSTQQYFPSHVGAVEMDPTQINYHYDQMLSSSSQNDSFNPTQQLMRVTPKIFHSLNNSESYSHKDQDFPSK 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03530 332 ProSiteProfiles TCP domain profile. 49 107 IPR017887 -
Mepo5g03530 332 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 294 IPR005333 GO:0003700
Mepo5g03530 332 MobiDBLite consensus disorder prediction 160 188 - -
Mepo5g03530 332 MobiDBLite consensus disorder prediction 160 179 - -
Mepo5g03530 332 Pfam TCP family transcription factor 48 175 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03530 Mepo-Chr5 43724679 43726915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03530 32 119 TCP Transcription Factor Family AT3G02150 76.136 1.55e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mepo5g03530 TCP 2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03530 - - psat:127121245 425.631