Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03518 ATGTCTTCATCAAATCCAACGGAATCTTCATCCGCCCAAAGGATCAATGAAGTGTTCTTAAGTTTTAGAGGGGAGGACACTCGTGCTTCATTCACCTCACATCTCTATACAGCTCTTCAAAACACTGGAATCAACGTTTTTAAGGACGATCATTCACTTCAAAAAGGAGATCACATTTCAACTTCACTACTGCAAGCAATCCAAGAGTCTCAAATTTCTGTAATTGTTTTCTCCAAAAATTATGCTGAATCACACTGGTGTTTAAAAGAGTCGGAGAAAATAATGGAATGTCGCAGAACCATAGGCCAAGTTGTTCTGCCGGTGTTCTACGATGTAGATCCATCCGAAAAATGGAGAGAGGCACTTCGTGAGGCAGCTAGCATCGCAGGGTTTGTGATACTCAACTCCAGGAATGAAAGTGAGGATATCAAAGATATTATTGACAAAGTTTCACATTTGCTTAACAAGACAGACTTGTTTATTGCAAACAATCCAGTGGGAATTGAATCTCAAGTGCAAGATGTGATTCAACTTCTACACGCCCGATCAAATGGTGTTCTACTACTGGGGATGTGGGGCATGGGGGGATTGGCAAAACAACCATTACAAAAACCATTTACAATAAGATTGGCCGCAATTTTGAAGGCAGGAGCTTCCTTGCAAATATTAGGGAAGATGGGGGGAAAATTGCCGGACAGGATTTCCAAAAATGTAGTTGAATATTCTGGGGGATTGCCACTTGCTCTGGAGGTCCTTGGGTCTTATTTATTTGATAAGACAGAATCAGAGTGGGAACTTGTATTAGAGAAACTTAAAAGAATTCCTAATGATCAAGTGCAGAAGAAGTTAAGAATAAGTTGTGATGATGATGAGCAAGAAATATTCCTTGATATAGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTTATACTTGTATTAAATGAATGTGGACTCTCTGCAGAAGTTGGCATAAGTGTCCTTGTTGAGCGAAGCCTTGTGGCTATTGATGATAAGAACATGCTTGGAATGCATGATTTGCTGCGGGATATGGGAAGAGGAATCATTCGCGAGGAGTCACCAAGGAGGCCAGAGAAGCGTAGCAGTACCAAAGCATTTGAGAAGATGGAGAGACTTAGGTTACTACAACTTGATGAGGTAAAACTTGAAGGAGATTTTGAATATGTTTCTAGAGATCTGAGATGGCTATCATGGAATGGATTAAGTCATATACCTACAAACTTTTTTCGAGAAAATTTAGTTTCGATCGAGTTAGAGAACAGCAATATCGAACTTCTGTGGAAGAAGAGCCTGAGGATGGAGAAGCTGAAAATTCTCAATCTTAGTCATTCTCACTATCTCACACGAAGCCCTGACTTTTCAAACATTCCTAATCTTGAAAAGCTAGTACTCAAAGATTGTCCAATGCTGTCTCAGCTTTCTCCTAGCATTAAACATCTCAAAAAAATTCTTCTGATAAATTTGGAAGACTATGTTAGCCTATGTAGCCTCCCAAAAAGTATCTATAAGTTAAAATCTCTGAAAACTCTCATTCTTTCTGGGTGTTCAATGATTGATAAGTTGGACTTGGAACAAATGGAATCTTTAACCACTCTGCTTGCAAATAACACTGCAATAACAAGAGCACCTTTTTCAGTAGTAAGGTCAAAAAGCATTGGGTATATTTCTTTGTGTGGCTACGAAGGGTTTTCGCGTGATGTGTTTCCATCTATCATTCGTTCTTGGATGTCACCAACAAATAATATCCCGTCCTTATTTCAAACATCTTCTCCTATGTCATCTCTTGTTGCCTTAGATGTACCAAGTAGTAGTTCCCATACACTATCAACTTTTTCTAAGCACCTTCCAAGGCTTCGAAGTCTTTTGGTGTATTGCGACTCCGAATATCAACTTTCTCTAGATGCAAAAATAATTTTGGATACTTTGTATGCCACAATTTCTAATGAATTGGACTCAACTTCAACTACATCACAAGTTTCAAATCTTACTGCTTCTGCATTAATTCAATGTTGCAATGAAGTGTACGTTTCAAAATCAAAACATTCCTTCAAGTCTCTTTTAATTCAAATGGGAATGAATTGCCAAGTCGCCAATATTCTGAAAGAGATTTTACAGAACATGGATGTCAATGGGAGTGGTGGTTGTTTCCTCCCCGGTGATAGTTATCCAAATTGGTTAACCTTTAGTTCCGAAGGTTCATCTGTAACTTTAGAAGTTCCACAAGTGCAAAGGCGTAACTTGAAGACAATGATGTGCATTGTCCATACTTCAACCCCAGATAATGTAACATCTAGTGGCCTTAAAAACGTGTTAGTGAAAAATTACACAAAGGCTACCATTCAGGTCTATAAGAGTGAGGCATTGGTCTCCCTTGACGATGATGAGGGTCTGAGGGTAATATCAAGTATAGAACCCGGTAACAAAGTGGAGGTCGTCGTTGTTTTTTAG 2469 0.3892 MSSSNPTESSSAQRINEVFLSFRGEDTRASFTSHLYTALQNTGINVFKDDHSLQKGDHISTSLLQAIQESQISVIVFSKNYAESHWCLKESEKIMECRRTIGQVVLPVFYDVDPSEKWREALREAASIAGFVILNSRNESEDIKDIIDKVSHLLNKTDLFIANNPVGIESQVQDVIQLLHARSNGVLLLGMWGMGGLAKQPLQKPFTIRLAAILKAGASLQILGKMGGKLPDRISKNVVEYSGGLPLALEVLGSYLFDKTESEWELVLEKLKRIPNDQVQKKLRISCDDDEQEIFLDIACFFIGMDRNDVILVLNECGLSAEVGISVLVERSLVAIDDKNMLGMHDLLRDMGRGIIREESPRRPEKRSSTKAFEKMERLRLLQLDEVKLEGDFEYVSRDLRWLSWNGLSHIPTNFFRENLVSIELENSNIELLWKKSLRMEKLKILNLSHSHYLTRSPDFSNIPNLEKLVLKDCPMLSQLSPSIKHLKKILLINLEDYVSLCSLPKSIYKLKSLKTLILSGCSMIDKLDLEQMESLTTLLANNTAITRAPFSVVRSKSIGYISLCGYEGFSRDVFPSIIRSWMSPTNNIPSLFQTSSPMSSLVALDVPSSSSHTLSTFSKHLPRLRSLLVYCDSEYQLSLDAKIILDTLYATISNELDSTSTTSQVSNLTASALIQCCNEVYVSKSKHSFKSLLIQMGMNCQVANILKEILQNMDVNGSGGCFLPGDSYPNWLTFSSEGSSVTLEVPQVQRRNLKTMMCIVHTSTPDNVTSSGLKNVLVKNYTKATIQVYKSEALVSLDDDEGLRVISSIEPGNKVEVVVVF 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03518 822 PRINTS Disease resistance protein signature 188 203 - -
Mepo5g03518 822 PRINTS Disease resistance protein signature 509 525 - -
Mepo5g03518 822 Pfam TIR domain 18 117 IPR000157 GO:0007165
Mepo5g03518 822 Gene3D - 218 289 IPR042197 -
Mepo5g03518 822 Gene3D Ribonuclease Inhibitor 366 718 IPR032675 -
Mepo5g03518 822 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 229 649 IPR044974 GO:0006952
Mepo5g03518 822 SMART till_3 15 164 IPR000157 GO:0007165
Mepo5g03518 822 Gene3D - 10 162 IPR035897 -
Mepo5g03518 822 ProSiteProfiles TIR domain profile. 14 154 IPR000157 GO:0007165
Mepo5g03518 822 SUPERFAMILY L domain-like 344 630 - -
Mepo5g03518 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 295 IPR027417 -
Mepo5g03518 822 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 131 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03518 Mepo-Chr5 43583894 43589150 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03518 204 553 WRKY Transcription Factor Family AT4G12020 32.512 2.31e-37 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03518 - - tpra:123910008 814.298