Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03517 ATGTCTGATAGTGAACCGGATGAAGTCACCGACGGGAGTAGAAACGAAACGTTGGAAATGTTTAATTTAAGAGAGATAGAGAAAATAAGGACAGAAGCCTTCCTATCACAACTACCACTTGAAACAAAACGTCGACTTGGATATCGAAATAGTAGTGAAGTGTTTTTAAGTTTTAGAGGGGAAGATACCCGTTCTTCCTTCACTTCACATCTTTATGCTTCACTTAAAAATGCCGGGATTAGAGTTTTCATGGACGAAGATTCACTTCAAAGAGGAGGTCATATTTCGACACTGTTACCACAAGAAATTGAACGTTCTAAAATTTCTATTGTTGTTTTTTCAAGAAACTATGCGGATTCACGATGGTGTCTCTGTGAGTTGGTGAAGATAATGGAGTGTCACAGAACCACTGCACAGATAGTGCTACCAGTGTTCTATGATGTTGATCCCTCTGAGGTTCGTCACCAAACTGGTGAGTTTGGACAAGCTTTTGAATGTCTCTTGAGCAAACTTTCGAAGAAGAAGAAGAAAGATAAGTCGCCGAAATGGAGAGAGGCTCTTCGTGGTGTTGCTGCCTTTGTTGGCTTTGTAGTTCTAAACTCCAGGAATGAAAGGGAGGTTATCGATCATATTGTTGCAGAAGTTGGTCTTTTGCTTGACAAGACAAACTTATTTGTTGCTAATTATCCGGTAGGAGTCGAATCTCGAGTGCAAGATATGATTCAACTCCTAAACACCCAACAATCAAACGATGTTCTATTCCTAGGGATTTGGGGTATGGGGGGAGCTGGTAAAACGACCATTGCAAAAGCCATTTACAACAAAGTTGGTCGCAATTTCGAAGGTAGAAGTTTCCTTCTAAATATCAGGGAAAATTGGGAGCATACTTCTAGACAAGTGTCTATACAAGAACAACTTATGTTTGATATCTTCAAAGAAACAACAACCAAGATACAAAGCATTGAGTCTGGGAAAATTACATTAAAGGATAGGCTCTTCCATAAAAGAGTGCTTCTCGTGCTTGATGATGTGAATAGTTTGGACCAACTAAATGCTTTGTGTGGAAATCATAACTGGTTTGGCTCAGGGAGTAGAATAATAATCACAACCAGAGATAAACGTTTACTTAAAGGGAGGAGAGTTGACAAAGTATACACCGTGAAAGAAATGGATGAAAATGAAGCAATAGAGCTTTTTAGTTGGCATGCATTTCAACAAGCGAGTCCTAGAAAAGATTTTACTGGAATTTCCAGGAAAATAGTTGAGTACTCTGGGCGATTGCCACTAGCTCTAGAAGTCCTTGGTTCCTATTTGCTTACAAAGAGGGTAATAGATTGGGAGATTATCTTGAAGAAAATGAAAAGAATTCCTCATGCTTGTGTACAGGAGAAGTTAAAAATAAGCTATGATGATTTAAATGACAATACCGAGAAAGAAATATTCCTGGACATAGCTTGTTTCTTTATTGGGATGGACCGATATGATGTTATACAAATATTAAATGGTTGTGGACTTTTTGCAGAAATTGGAATAAGTGTCCTTGTTGAGCGAAACCTTGTAACTGTCGATGATAAGAACAAGCTTGGAATGCATGATATGTTACGAGATATGGGAAGAGAAATAATTCGTACTCAATCTTACATGTGTCCTGACGAGTATAGCAGGTTATGGTTTCATCGGGATGTCTTTGATGTTCTATCTAGACCTAGTGGAAAAGCAGCTGTTGAAGGATTAGCTTTAAAGTTCCCAATAGCTAGTTCAAAATGTTTTTATACTATAGCATTTAAGAAGATGAAGAGACTAAGATTACTTCAACTTGCTGGAGTACAACTTAATGGAGATTTCAAGTATCTTTCAAGAAATCTTAGATGGCTGAGTTGGGATGGATTTCCTTTAGCATCCTTACCTTCAAACTTTTATCAAGAAAATATAGTTTCCCTTGAGTTAGAAAATAGCAATATCAGACATGTGTGGAAAGAGACCCAGAGGATGGAGATGCTGAAAATCCTAAACCTTAGCCATTCTCATTATCTGACACAGACCCCTGACTTCTCAAATTTGCCTAATCTTGAAAAGCTTGTACTCGCAGATTGTTCAAGGCTGTCTGAGGTTTCCAATAGCATTGGAGATCTCCACAAAGTTCTTCTAATAAATTTGGAAGACTGTATTAGCTTATGTAGCCTTCCATGTAGCATCTATAAGCTGAATTCTTTGAAAACTCTCATTCTATCTGGTTGTTTAAAGATTGACAAGTTGGATGACGACTTAGAACATATGGAATCTCTAACCACTTTGCTTGCAAATAACACTGCTATAACAAGAGTACCTATTTCAGTAGTAAGGTCAAAAAGCATCGGATATATTTCTTTGTGTGGCTATGAAGGACTCTCATGTGATGTGTTTCCATCTATTATTTGGTCTTGGATGTCACCAACAAATAACGTCCCATCCCCATTTCAAACATTGAATATCATGTCATCTCTTGTTCATTTAGATGTACCACATAGTAGTTCCCACAAACTATCATCGATTTCCCAGTACCTTCCAAGTTTTCGAAGTCTTTGGGTGGAGTGCAGCTCAGAACTTCAACTTTCTCATGATGCAAAGATAATTTTGGATGCCTTATATGCCACAAATTCTAGACAATTGAAATCAATTGCAACTACATCACAAGTATCAAGAAATTCCTTGAGATCTCTGTTCATTCAACTCGGAATGAATTGCCAAGTTGCCAATATTCTAAAAGAGAAAATTTTACAGAATATGACTGTCGATGAAAATGGTGGTTGTGTGCTCCCCAATAATAGTTATCCAGATTGGTTAGGCTTCAGTTATGATGGCACTTCTGTAATTTTTGAAGTCCCTCAAGTGGAAGGGCATAATTTGAAGTCATTGATGTGCATTGCCTATACTTCAACTCCGGATAACATAACATCGGATGGTCTTAAACACGTGTTAGTGAAAAACTACACAAAGGCCACCATTCAGCTATATAAGAGAGAGGCATTAGCTTCCTTTGAAGATGAGGAACTGAAGAGAGTAATATCAAGTATAGGACCTGGAAACAAAGTGGAGGTTGTTGTTGTTTTTGAGAACGGTTTCATTGTGAAGAAAACAACAGTTTATCTCGTATATGACAAACCAATTGGTGAAAAAATGGAGCAATGTCAAACTATTAAAGAAAATGCTATTGTTTGTAATGGTGGTGATAATGAATGCAGTGTGAGGAGGAGCTCTCCGCAAGTGGAGCTCACGGATGAAAATGTTGGCATTGATAGTTGTTGTGGATTGATCAAATACAGTTTCAGACAGTGGATTACATATTTTATGTGTAGATTAGTGGAGTGTTGGGGATAG 3357 0.3777 MSDSEPDEVTDGSRNETLEMFNLREIEKIRTEAFLSQLPLETKRRLGYRNSSEVFLSFRGEDTRSSFTSHLYASLKNAGIRVFMDEDSLQRGGHISTLLPQEIERSKISIVVFSRNYADSRWCLCELVKIMECHRTTAQIVLPVFYDVDPSEVRHQTGEFGQAFECLLSKLSKKKKKDKSPKWREALRGVAAFVGFVVLNSRNEREVIDHIVAEVGLLLDKTNLFVANYPVGVESRVQDMIQLLNTQQSNDVLFLGIWGMGGAGKTTIAKAIYNKVGRNFEGRSFLLNIRENWEHTSRQVSIQEQLMFDIFKETTTKIQSIESGKITLKDRLFHKRVLLVLDDVNSLDQLNALCGNHNWFGSGSRIIITTRDKRLLKGRRVDKVYTVKEMDENEAIELFSWHAFQQASPRKDFTGISRKIVEYSGRLPLALEVLGSYLLTKRVIDWEIILKKMKRIPHACVQEKLKISYDDLNDNTEKEIFLDIACFFIGMDRYDVIQILNGCGLFAEIGISVLVERNLVTVDDKNKLGMHDMLRDMGREIIRTQSYMCPDEYSRLWFHRDVFDVLSRPSGKAAVEGLALKFPIASSKCFYTIAFKKMKRLRLLQLAGVQLNGDFKYLSRNLRWLSWDGFPLASLPSNFYQENIVSLELENSNIRHVWKETQRMEMLKILNLSHSHYLTQTPDFSNLPNLEKLVLADCSRLSEVSNSIGDLHKVLLINLEDCISLCSLPCSIYKLNSLKTLILSGCLKIDKLDDDLEHMESLTTLLANNTAITRVPISVVRSKSIGYISLCGYEGLSCDVFPSIIWSWMSPTNNVPSPFQTLNIMSSLVHLDVPHSSSHKLSSISQYLPSFRSLWVECSSELQLSHDAKIILDALYATNSRQLKSIATTSQVSRNSLRSLFIQLGMNCQVANILKEKILQNMTVDENGGCVLPNNSYPDWLGFSYDGTSVIFEVPQVEGHNLKSLMCIAYTSTPDNITSDGLKHVLVKNYTKATIQLYKREALASFEDEELKRVISSIGPGNKVEVVVVFENGFIVKKTTVYLVYDKPIGEKMEQCQTIKENAIVCNGGDNECSVRRSSPQVELTDENVGIDSCCGLIKYSFRQWITYFMCRLVECWG 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03517 1118 Gene3D Ribonuclease Inhibitor 586 928 IPR032675 -
Mepo5g03517 1118 FunFam Disease resistance protein (TIR-NBS-LRR class) 48 221 - -
Mepo5g03517 1118 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 53 879 IPR044974 GO:0006952
Mepo5g03517 1118 ProSiteProfiles TIR domain profile. 50 219 IPR000157 GO:0007165
Mepo5g03517 1118 Gene3D - 224 384 IPR027417 -
Mepo5g03517 1118 PRINTS Disease resistance protein signature 331 345 - -
Mepo5g03517 1118 PRINTS Disease resistance protein signature 685 701 - -
Mepo5g03517 1118 PRINTS Disease resistance protein signature 254 269 - -
Mepo5g03517 1118 PRINTS Disease resistance protein signature 424 438 - -
Mepo5g03517 1118 Gene3D - 389 473 IPR042197 -
Mepo5g03517 1118 Pfam NB-ARC domain 234 466 IPR002182 GO:0043531
Mepo5g03517 1118 SUPERFAMILY Toll/Interleukin receptor TIR domain 52 195 IPR035897 -
Mepo5g03517 1118 Gene3D - 48 223 IPR035897 -
Mepo5g03517 1118 SMART till_3 51 193 IPR000157 GO:0007165
Mepo5g03517 1118 Pfam TIR domain 54 215 IPR000157 GO:0007165
Mepo5g03517 1118 SUPERFAMILY L domain-like 555 900 - -
Mepo5g03517 1118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 484 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03517 Mepo-Chr5 43477394 43565858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03517 59 779 WRKY Transcription Factor Family AT4G12020 30.924 2.65e-83 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03517 - - tpra:123910008 1585.08