LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g03515	ATGAGGAGGGTGATCGGTGTTGAATATCAATGTCCATTGTCTGACTCAGCCGGATCACTTCGGTTCAACCGGATGAAACTCACAAACGACGACGACGTGAGAACCATGAACTACGAAGAGATCAGGGCTCTGCTGGAGGGACCAGAGGAAGAAGTTAGTTTAGTTATGGCAGAAATTGTTGCAGGAGCTTTTCTATCTGCAATGGAAAAAAGATTGTTAAGGAGCAATGACGTGTTCTTAAGTTTTCGAGGGGAAGACACACGTACTTCATTCGTTCCACGTCTATATGCTACTCTTCAAAATGCTGAAGTTATTGTTTTTATGGCCGATTATTCGCTTCAAAGGGGAGATCACATTGCAACATCACTACTACGAGCAATCGAAGATTCTAGAATTTCTGTTATAGTTTTGTCAAAAAACTACGCAGATTCGCGGTGGTGTTTGGATGAGTTGGTGAAAATAATGGAGTGTCGCTTAACCATAGGGCAGATAGTGCTGCCGGTATTCTACGATGTTGATCCCTCAGAGGTACGACACCAAACTGGTGAGTTTGGAAAAGCTTTTGAAAGTCTCTTGAGAGGAATTATGAAGAAGAAAGACAAGTCGTTCAAATGGAGAGAGGCGCTTCGTGAGGTTGCTGGCCTTGCTGGCTTTGTAGTTCCAAATTTCAGGAACGAAAGTGAGGCTATAAAAGATATTATCGAAAATGTTGTGCGTTTGCTAGACAAGAAAGACCTGTTCGTTGCTAATCATCCAGTGGGAGTTGAACCTCGAGTGCAAGATATGATGCAATTGTTGGATAAAGAAATGCAGCAAGATGTAGGCTCTGAATATTCAGAAGAATGCACAGACTTTGAATATTTGGAAGATATACTTCATCTGCCGGATATCCAACAATCTTCCCTACAAAAAAAAGATATCCAACAGTCTAATAATGTTCTACTACTAGGGATGTGGGGCATGGGTGGAATTGGCAAAACCACCATTGCAAAAGCCATTTACAATAAAATTGGTCGTAATTTTGAAGGTAGGAGCTTCCTTGCAAATATTAGGGAAGTTTGGGAGCAAAATGATGGACAAGTATCTTTACAACAACAACTTCTATTCGATATTTGCAAAGCATCAACGACAAATATACAAAACACTGATGCAGGAAAGAATACATTAATGGATAGACTCTCCCGTAAAAAGGTACTTATTGTACTGGATGATGTGAGTACATCTGATCAATTGAATGCTTTGTGTGGATCTTGTGAATGGTTTGGTCCCGGTAGTAGGATAATTATAACAACTAGAGATAAACATATACTTAAAGAGATAGGAGTTTACCAAGTATATGAAATGAAAGAAATGAATGAAAATGAATCAATAGAGCTTTTTAGTTGGCATGCTTTCAAGCAAGCAAGACCCAAAAAAGATTTTGCTGCAATGTCCAAAAATGTAGTTGAGTATTCTGGGGGATTGCCACTAGCTTTGGAAGTCCTTGGGTCATATTTATTTGACAGGAAGGTAACAGAATGGGAGAGCGTATTGAAAAAACTCAAAGAAATTCCTAATCATCAAGTACAAAAGAAATTAAGAATAAGCTATGATGGTTTAAGTGATTATACGGAGAAAGAAATATTCCTTGACGTGGCTTGTTTCTTTATTGGGATGGTTCGAACTGATGTTGTCAATATATTAGATGGTTGTGACCTTTATGCAGAAATTGGAATAAATGTCCTTTTGGAGCGAAGCCTTGTGACTGTTGATGATAGGAACAGGCTTAGAATGCATGCTTTGTTGCGAGATATGGGAAGAGAAATCGTTCGTGAGAAATCACAAACAATCTTGATGATTGTAGCAGGTTGTGGTCTAGGAACAAAAGTCGAGGGACTGACTTTGAAGTTGCCAAGAGATAATGTACAATGTTTTAATACTGAAGCATTTGAGAAGATGACAAAACTCAGATTGTTTCAACTTGCTGGAGTAGAACTTGATGGGAATTTCGATAAACTTTCGAAAAATCTGAGATGGTTTTCTTGGGATGGTTTTCCTTTAACATCCATCCCTTCAAGCTTTGTTCAAGGAAATTTAGTTTCCCTTGAATTAGAAAACAGCAAAGTCAAATCTCTATGGAAAAAGGCACAGAGTATGGAAAAGCTGAAAATTCTCAATCTTAGTCACTCTCATCATCTGATACAGACCCCAGACTTTTCAAAAATGTCTAATCTTGAAAAGCTAATACTCAAAGATTGTCCAAGGTTGCGTGAGGTTTCCCATAGCATTGGACATCTCGATAAAATTCTTTTGATAAATTTGGAAGATTGTATTAGCCTTTCTAGCCTTCCAAGAAGCATCTATAAGTTGAAATCTCTGAAAACTCTCATTCTTTCTGGGTGTTCAATGATTAAAAAGTTGGAAGAGGACTTGGAACAAATGGAATCTTTAACCACCCTGATTGCTAATGACACTGCAATAACAAGAGTTCCCTTTGCAGTAGGAAGATTGGTAGCTAATAATGTTCTGATTTCTGAAGCATGA	2523	0.3829	MRRVIGVEYQCPLSDSAGSLRFNRMKLTNDDDVRTMNYEEIRALLEGPEEEVSLVMAEIVAGAFLSAMEKRLLRSNDVFLSFRGEDTRTSFVPRLYATLQNAEVIVFMADYSLQRGDHIATSLLRAIEDSRISVIVLSKNYADSRWCLDELVKIMECRLTIGQIVLPVFYDVDPSEVRHQTGEFGKAFESLLRGIMKKKDKSFKWREALREVAGLAGFVVPNFRNESEAIKDIIENVVRLLDKKDLFVANHPVGVEPRVQDMMQLLDKEMQQDVGSEYSEECTDFEYLEDILHLPDIQQSSLQKKDIQQSNNVLLLGMWGMGGIGKTTIAKAIYNKIGRNFEGRSFLANIREVWEQNDGQVSLQQQLLFDICKASTTNIQNTDAGKNTLMDRLSRKKVLIVLDDVSTSDQLNALCGSCEWFGPGSRIIITTRDKHILKEIGVYQVYEMKEMNENESIELFSWHAFKQARPKKDFAAMSKNVVEYSGGLPLALEVLGSYLFDRKVTEWESVLKKLKEIPNHQVQKKLRISYDGLSDYTEKEIFLDVACFFIGMVRTDVVNILDGCDLYAEIGINVLLERSLVTVDDRNRLRMHALLRDMGREIVREKSQTILMIVAGCGLGTKVEGLTLKLPRDNVQCFNTEAFEKMTKLRLFQLAGVELDGNFDKLSKNLRWFSWDGFPLTSIPSSFVQGNLVSLELENSKVKSLWKKAQSMEKLKILNLSHSHHLIQTPDFSKMSNLEKLILKDCPRLREVSHSIGHLDKILLINLEDCISLSSLPRSIYKLKSLKTLILSGCSMIKKLEEDLEQMESLTTLIANDTAITRVPFAVGRLVANNVLISEA	840

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g03515	840	PRINTS	Disease resistance protein signature	315	330	-	-
	Mepo5g03515	840	PRINTS	Disease resistance protein signature	781	797	-	-
	Mepo5g03515	840	PRINTS	Disease resistance protein signature	392	406	-	-
	Mepo5g03515	840	PRINTS	Disease resistance protein signature	485	499	-	-
	Mepo5g03515	840	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	250	544	IPR027417	-
	Mepo5g03515	840	Coils	Coil	797	817	-	-
	Mepo5g03515	840	Gene3D	-	74	247	IPR035897	-
	Mepo5g03515	840	SMART	till_3	75	215	IPR000157	GO:0007165
	Mepo5g03515	840	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	77	813	IPR044974	GO:0006952
	Mepo5g03515	840	Pfam	NB-ARC domain	309	530	IPR002182	GO:0043531
	Mepo5g03515	840	Gene3D	-	450	534	IPR042197	-
	Mepo5g03515	840	SUPERFAMILY	"Winged helix" DNA-binding domain	521	608	IPR036390	-
	Mepo5g03515	840	SUPERFAMILY	L domain-like	627	830	-	-
	Mepo5g03515	840	ProSiteProfiles	TIR domain profile.	74	241	IPR000157	GO:0007165
	Mepo5g03515	840	SUPERFAMILY	Toll/Interleukin receptor TIR domain	76	218	IPR035897	-
	Mepo5g03515	840	Gene3D	Ribonuclease Inhibitor	621	836	IPR032675	-
	Mepo5g03515	840	Pfam	TIR domain	77	238	IPR000157	GO:0007165
	Mepo5g03515	840	Gene3D	-	289	444	IPR027417	-
	Mepo5g03515	840	FunFam	Disease resistance protein (TIR-NBS-LRR class)	73	243	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo5g03515	Mepo-Chr5	43426891	43435703	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo5g03515	637	824	WRKY Transcription Factor Family	AT5G45050	26.702	1.04e-06	50.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g03515	-		-	cam:101494533	970.304