LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g03514	ATGGTGATGATGATAGAGATGGTGAAAGCATTATCTTGTGTGATTGGAGTTACATATGAAGAAGTGTTCTTAAGTTTCCGAGGGGAGGACACTCGTGCCTCCTTCATTTCACATCTCTATGCTTATCTTCAACAATCTGGGATAACCGTTTTTAGGGACGATGATTCTCTTCAATGGGGAGATCACATTTCAACATCATTACGTCAAGGAATTGAAAGGTCTAGAATTGCTATAATTGTTTTCTCAAGAAATTATGCCAATTCGCAATGGTGTTTGGATGAGTTGAAGTGTATAATGAATTGTCGCAAAACCAAAGGGCAGGTAGTTTTGCCAGTGTTCTTTGATGTTGATCCATCTGAAGTACGTCATCAAACAGGCGAGTTTGGAAATGCTTTTCAAAATCTTTTGAACAAAATTTCGGAGAAAGAAAACATGCATTGGGAGAATTTTGAATGGAAGGTCGATTCAAACTCAACTCATAAGTATTTGGAACAAACCTGGAGAGCTGCTCTTCGTGAGGCGACTAGCCTTGCAGGGTTCATAGTCTTCAATTCCAAGAATGAAAGTGAGGCTATAAAAGATATTGTTGAAAAAGTTACACGTTTGTTTGACAAAAGAAATTTGTTTATTGCTAATAATCCTGTGGGAGTGGAATCTCGTGTGCAAGATATGCTTCAATTGCTAGAACAAGATATCAAACAATCAAATGATGTTCTACTACTAGGGATGTGGGGTATGGGAGGTATTGGTAAAACAACCATTGCAAAAGCCATCTACAATGAAATTGGCCGCAATTTTGAATGTAGAAGCTTCCTTGCAAATATTAGGGAAGTTTGGGAGCAAAATGCTGGAAAAGTGAATTTACAAGAACAACTTTTGTTTGATATATGCAAAGAAACGAAAACCAAAATACAAAACATTGATTCGGGGAATAATATATTAAGGGATAGACTATGTCATAAAAGAGTACTTCTCATGCTTGATGATGTGAGTACACTAGACCAACTGAATTATTTGTGTGGAAATCGCAAATGGTTTGGTTCTGGGAGTAGAATTATCGTCACAACCAGAGATATGCATATTCTTAGAGGGAATAGGGTTGATCATGTATACAAAATGAAAGAAATGGATGAAAGCGAGTCAATTGAGCTTTTATGTTTGAATGCATTCAAGCAATCAAGTCCAATAGAAGATTTTGCTGAAATTTCTAAAAATGTAGTTGAGTATTCTGGGGGATTGCCGCTAGCTCTGGAAGTCCTTGGGTCACATTTGTTTGATAGAGGAATAACAGAATGGAAGAGTGTATTAGAAAAACTCAAAAAAATTCCCAATGATCAAGTGCAAAAGAAATTAAAAATAAGCTATGATGACTTAAATGATGATACTGAGAAAGAAATATTCCTTGACATAGCTTGTTTTTTTATTGGGATGGATAGAAATAATGTTATACATATATTAAATGACTGTGAATTTTATCCGGAAAGTGGGATGTCTGTACTTGTTGAGCGAAGCCTTGTAACTGTGGATGAAAGGAATAGGCTTGGAATGCATGATTTGTTGCGAGATATGGGTAGAGAAATCATTCGTGAGACATCACCAAAGGATCCGGAGGAGCGTAGCAGATTGTGGTTTAATAAGGATGTGCTTGAAGTATTATCAGAACAAACAGGAACAAAAGTTGTTGAGGGTTTGACTTTGAAGTTGCCAAGAGAAAATGTGAAATGTTTTAGTACTAAAGCATTTAAGAAGATGAAGAGACTCAGATTGCTTCAACTTGATGGTATACAACTTGATGGAAATTTTGAGTATCTTTCAAGAAATCTAAAATGGTTATCTTGGAATGCATTTCCTTTAGCATGCATACCTACCAACTTTTATCAAGAAAATTTGGTTTGCATTGAGTTAGAAAACAGCAATGTCAAAGTTGTGTGGAAAGAGAACCAGAGGCTGGAGAAGCTGAAAATTCTCAACCTTAGTCATTCTCATTATCTGACACAGACACCAGATTTTTCAAACATGCCTAATCTTGAACAGTTAGTACTCAAAGATTGTCCAAGGTTGTCTGAGGTTTCACATAGTATTGGACATCTCAAGAAAATTCTTCTCATAAATTTGGAAGATTGTATTAGCCTATGTAGCCTCCCAAGAAGCATCTATAAGTTGAAATCTCTGAAAACTCTTATTCTTTCTGGTTGCTTAAAGATTGACAAGTTGGAAGAGGACTTGGAACAACTGGAATCTTTAACAACTCTGCTAGCAAATAACACCGGAATAACAAAAGTTCCATTTTCAGTTGTAAGTATAAAATCGACACATAATCCTGGAATGAGTTTTCTTTTGGTTGCATGA	2349	0.3602	MVMMIEMVKALSCVIGVTYEEVFLSFRGEDTRASFISHLYAYLQQSGITVFRDDDSLQWGDHISTSLRQGIERSRIAIIVFSRNYANSQWCLDELKCIMNCRKTKGQVVLPVFFDVDPSEVRHQTGEFGNAFQNLLNKISEKENMHWENFEWKVDSNSTHKYLEQTWRAALREATSLAGFIVFNSKNESEAIKDIVEKVTRLFDKRNLFIANNPVGVESRVQDMLQLLEQDIKQSNDVLLLGMWGMGGIGKTTIAKAIYNEIGRNFECRSFLANIREVWEQNAGKVNLQEQLLFDICKETKTKIQNIDSGNNILRDRLCHKRVLLMLDDVSTLDQLNYLCGNRKWFGSGSRIIVTTRDMHILRGNRVDHVYKMKEMDESESIELLCLNAFKQSSPIEDFAEISKNVVEYSGGLPLALEVLGSHLFDRGITEWKSVLEKLKKIPNDQVQKKLKISYDDLNDDTEKEIFLDIACFFIGMDRNNVIHILNDCEFYPESGMSVLVERSLVTVDERNRLGMHDLLRDMGREIIRETSPKDPEERSRLWFNKDVLEVLSEQTGTKVVEGLTLKLPRENVKCFSTKAFKKMKRLRLLQLDGIQLDGNFEYLSRNLKWLSWNAFPLACIPTNFYQENLVCIELENSNVKVVWKENQRLEKLKILNLSHSHYLTQTPDFSNMPNLEQLVLKDCPRLSEVSHSIGHLKKILLINLEDCISLCSLPRSIYKLKSLKTLILSGCLKIDKLEEDLEQLESLTTLLANNTGITKVPFSVVSIKSTHNPGMSFLLVA	782

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g03514	782	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	21	752	IPR044974	GO:0006952
	Mepo5g03514	782	Pfam	NB-ARC domain	228	456	IPR002182	GO:0043531
	Mepo5g03514	782	SUPERFAMILY	"Winged helix" DNA-binding domain	446	552	IPR036390	-
	Mepo5g03514	782	PRINTS	Disease resistance protein signature	410	424	-	-
	Mepo5g03514	782	PRINTS	Disease resistance protein signature	648	664	-	-
	Mepo5g03514	782	PRINTS	Disease resistance protein signature	240	255	-	-
	Mepo5g03514	782	PRINTS	Disease resistance protein signature	317	331	-	-
	Mepo5g03514	782	Gene3D	-	18	199	IPR035897	-
	Mepo5g03514	782	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	205	470	IPR027417	-
	Mepo5g03514	782	Gene3D	-	200	370	IPR027417	-
	Mepo5g03514	782	Pfam	TIR domain	22	199	IPR000157	GO:0007165
	Mepo5g03514	782	Coils	Coil	735	755	-	-
	Mepo5g03514	782	Gene3D	-	375	459	IPR042197	-
	Mepo5g03514	782	Gene3D	Ribonuclease Inhibitor	558	778	IPR032675	-
	Mepo5g03514	782	ProSiteProfiles	TIR domain profile.	18	203	IPR000157	GO:0007165
	Mepo5g03514	782	SUPERFAMILY	Toll/Interleukin receptor TIR domain	21	142	IPR035897	-
	Mepo5g03514	782	SMART	till_3	19	177	IPR000157	GO:0007165
	Mepo5g03514	782	FunFam	Disease resistance protein (TIR-NBS-LRR class)	17	205	-	-
	Mepo5g03514	782	SUPERFAMILY	L domain-like	566	765	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo5g03514	Mepo-Chr5	43419211	43424657	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo5g03514	19	765	WRKY Transcription Factor Family	AT4G12020	31.818	2.75e-89	306

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g03514	-		-	cam:101494533	1140.95