Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03513 ATGAATGACAACAACGGTTGTGGGGGTGAGAGAGAAGGAAGTCGAATCTTCCTCGGAGCAATAATGGACGGATTCTCCACATCGGGCAGAGAACCGAGGGAGTCAACCAAAAGGAAGGTAAAGGATGCCATAGAAATTCTCGACAGGATCCAACTTCGTTGGAGAGTGCAAGCAGCGAGGAGCTATGAAGTGTTCTTAAGTTTTAGAGGAGAAGATACCCGTGCGTCCTTCACCTCACATCTCTATGCTTCTCTTCAAAATGCTGGGATCAACATTTTCAGGGACGACGATTCGCTTGTAAGAGGAGATCATATTTCTAAAGCCCTACTGCAAGCAATTGAAAAGTCTCAAATTGCTGTGATTGTTTTTTCAATAAATTATGCAAATTCACAATGGTGTCTAAATGAGTTGGTCAAGATAATGGAGTGTCACAGGACCATAGGGCAGGTGGTTTTGCCAATATTCTACAACGTAGATCCATCTGAGGTACGCCATCAGAAAGGCGAGTTTGGAAAATCATTTCAAAGTCTCTTGAATAAAATTTCAAATGAGTTTTTGAATTTGGAACCGTGTTGGAGAGCATTGCTTCGTGAGGCAGCCGACCTTGCAGGATTTATAGTTCTAAATTCCAGGAATGAAAGTGAGAATATAAAGGATATTGTTGAAAAAGTTACTCGTATGCTTGACAAGACCGACTTGTTCGTTGTTGATAATCCTGTCGGAGTTGAATCTCGAGTGCAAGATATAATTCAACTTCAACACGTCCAACAATCAAATAATGTTCTAATAATAGGGATGTGGGGTATGGGGGGTATTGGTAAAACAACCATTGCAAAAGCCATTTATAATGAAATTGGTCGCAATTTTGATGGGAGGAGCTTCCTTGCAAATGTAAGGGAAGTATGGGAGCAAACTACGGGACAAGTGTATTTACAAGAACAACTTATGTTTGATATCTTCAAAGGAACCGCGACCAAAATACAAAACATTGATTCCGGAAAAGTTATACTAAGGGATAGACTTCGCCACAAAAGAGTACTTCTTGTTCTTGATGATGTAAATGAATTGGACCAACTGGATGCTTTGTGTGGTAGTCATGAATGGTTTGGTTGTGGTAGTAGAATAATCATTACAACCAGAGATAGGCATATACTTAGAGGGAGTAGGGTTGACAAAGCATACACAATGAAAGAAATGGATGACACAGAATCAATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGTGAGTCCCATAGAAGATTTTGCTCAGATTTCTAGAAATGTGGTTGAGTATTGTGGGAGATTACCGCTCGCTTTAGAGGTCCTTGGACGCTATTTGTTTGGTAGGAAAGTAACAGAATGGAAATGTGTATTGGAGAAACTCAAAAGGATTCCCAATAATAAAGTGCAAAGTAAGTTAAAAATAAGCTATGATGGATTGGATGATGATTTCCAGAGAGAGATATTCCTTGATATAACTTGTTTCTTTATTGGGATGGACCGAAATGATGTTATACATATATTAAGTGATTGTGGACTTTTTCCTGAAAATGAAATAAGTGTCCTTGTTGAGCGAAGTCTTGTAACTATTGATGACGAAAACAGGCTTGGAATGCATGATTTGCTCCGAGATATGGGAAGAGAAATCATTTGTGATACATCAAGAAAGGAACCAGAGGAGCGTAGCAGGTTATGGTATCATGAGGATGTGCTTGATGTATTATCAGCGCAAACTGGAACAAAATCTGTCGAGGGACTGGCTTTGAAGTTACCAAGTGGTGATGCAAAATGTTTTAGTACTAAAGCCTTTCAGAAGATGAGAAAACTCAGATTGCTTCAACTTTCTGGTGTACAACTTTATGGAGATTTTGAATATCTTTCAAGGAAACTGAAATGGCTGAGTTGGAATGGATTTCCTTTAAGATGCATACCTACAAACTTTTATCAAGGAAATTTAGTTTCAATTGAGTTAGAAAATAGTAATCTCAACCTTGTGTGGAAAGAGACCCAGAGGCTGGAGAAGCTGAAAATTCTCAATCTTAGTCATTCTCATCATCTAACACACACCCCGGACTTTTCATACTTGCCTAATCTTGAAAAGCTAGTACTCAAAGATTGTCCAATGTTGACCGAAGTTTCTCCTACCATTGGAGATCTCAGTGAAATACTTCTAATAGATTTAGAAGATTGTGTTAGCCTTCGCAGCCTTCCAAGAAGCATCTATAACTTGAAATATTGGTGTCATAAGATCCTTGCAATGATTGGTGTCGTGTATCTAGATTATATCCAGTTTCCCAACAGCAGGCATGTCCAGAAATTTGCCATTAAAGGGAGTGGTGGTGGAGCTATTGTGCTCATTATGCTGGCAGGCTATTGA 2379 0.3913 MNDNNGCGGEREGSRIFLGAIMDGFSTSGREPRESTKRKVKDAIEILDRIQLRWRVQAARSYEVFLSFRGEDTRASFTSHLYASLQNAGINIFRDDDSLVRGDHISKALLQAIEKSQIAVIVFSINYANSQWCLNELVKIMECHRTIGQVVLPIFYNVDPSEVRHQKGEFGKSFQSLLNKISNEFLNLEPCWRALLREAADLAGFIVLNSRNESENIKDIVEKVTRMLDKTDLFVVDNPVGVESRVQDIIQLQHVQQSNNVLIIGMWGMGGIGKTTIAKAIYNEIGRNFDGRSFLANVREVWEQTTGQVYLQEQLMFDIFKGTATKIQNIDSGKVILRDRLRHKRVLLVLDDVNELDQLDALCGSHEWFGCGSRIIITTRDRHILRGSRVDKAYTMKEMDDTESIELFSWHAFKQVSPIEDFAQISRNVVEYCGRLPLALEVLGRYLFGRKVTEWKCVLEKLKRIPNNKVQSKLKISYDGLDDDFQREIFLDITCFFIGMDRNDVIHILSDCGLFPENEISVLVERSLVTIDDENRLGMHDLLRDMGREIICDTSRKEPEERSRLWYHEDVLDVLSAQTGTKSVEGLALKLPSGDAKCFSTKAFQKMRKLRLLQLSGVQLYGDFEYLSRKLKWLSWNGFPLRCIPTNFYQGNLVSIELENSNLNLVWKETQRLEKLKILNLSHSHHLTHTPDFSYLPNLEKLVLKDCPMLTEVSPTIGDLSEILLIDLEDCVSLRSLPRSIYNLKYWCHKILAMIGVVYLDYIQFPNSRHVQKFAIKGSGGGAIVLIMLAGY 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03513 792 Gene3D - 398 482 IPR042197 -
Mepo5g03513 792 Pfam TIR domain 62 230 IPR000157 GO:0007165
Mepo5g03513 792 FunFam Disease resistance protein (TIR-NBS-LRR class) 58 230 - -
Mepo5g03513 792 SUPERFAMILY Toll/Interleukin receptor TIR domain 60 204 IPR035897 -
Mepo5g03513 792 Gene3D Ribonuclease Inhibitor 590 752 IPR032675 -
Mepo5g03513 792 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 493 IPR027417 -
Mepo5g03513 792 Gene3D - 226 392 IPR027417 -
Mepo5g03513 792 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 62 746 IPR044974 GO:0006952
Mepo5g03513 792 ProSiteProfiles TIR domain profile. 60 228 IPR000157 GO:0007165
Mepo5g03513 792 PRINTS Disease resistance protein signature 433 447 - -
Mepo5g03513 792 PRINTS Disease resistance protein signature 671 687 - -
Mepo5g03513 792 PRINTS Disease resistance protein signature 263 278 - -
Mepo5g03513 792 PRINTS Disease resistance protein signature 340 354 - -
Mepo5g03513 792 SMART till_3 61 202 IPR000157 GO:0007165
Mepo5g03513 792 Gene3D - 59 225 IPR035897 -
Mepo5g03513 792 SMART AAA_5 260 400 IPR003593 GO:0016887
Mepo5g03513 792 SUPERFAMILY L domain-like 539 746 - -
Mepo5g03513 792 Pfam NB-ARC domain 250 479 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03513 Mepo-Chr5 43410139 43417760 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03513 55 775 WRKY Transcription Factor Family AT4G12020 29.716 1.85e-80 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03513 - - cam:101512894 1057.74