Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03487 ATGGCTGCTCCCGAAATCAACTGGGACAGGCTAGATAAAACCAAATTCTACGTAGTGGGAGCTGGACTCTTTTCAGGTGTTACCGTGGCACTCTACCCTGTGTCTGTTGTGAAGACTAGGATGCAAGTTGCTTCAAACCATACTGCGGAGAGAAGTGCATTTTCTGTTGTCAAAGGATTACTCAAGACAGATGGCATTCGTGGTTTGTATAAAGGGTTTGGCACTGCCGTCACCGGAGCAATTCCTGCCAGAATCATATTTCTCACTGCCTTGGAGACCACAAAGGTGGCTTCCTTCAAGATGCTTGAACCATTTAAACTATCTGAAACTACACAGGCTGCCATAGCAAATGGCATTGGTGGCATGACATCGTCGATCTGTGCACAAGCTGTGTTTGTTCCAATTGACGTGATTAGCCAAAAGTTGATGGTGCAAGGGTACTCAGGCCATGCCCAGTATAGTGGGGGCCTGGATGTTGCTCGCAAGTTGATAAGGTCCGAGGGAATCCGGGGGTTATACCGAGGGTTTGGTCTATCTGTCATGACTTACTCACCATCTAGCGCTGTTTGGTGGGCAAGTTACGGCTCAAGTCAACGCTTCTTATGGAGATTCTTAGAAGATGATGTCAAATCTGAGAAAGGTACTCCTAGTCTGCCAAATATTGTTTTGGTTCAGGCAGCTGGGGGAATTATTGCTGGTGCCACTGCATCGTGCATTACAACTCCATTGGATACAATCAAGACACGGTTACAGGTGATGGGACATGGAAAGAAAAGCTCTGTTAAACAAGTTGTTAAAGAATTGATCAGTGAGGATGGTTGGAAAGGTGTATATAGAGGATTAGGTCCAAGATTTGTGAGCATGTCAGCATGGGGTACTTCAATGATATTGGCTTATGAATATCTGAAGCGCCTATGCGCAAAAGATGAAGAAGCAGCTGGTCAGCAATCTGGTATTGTTTCAACTGATTAG 972 0.4547 MAAPEINWDRLDKTKFYVVGAGLFSGVTVALYPVSVVKTRMQVASNHTAERSAFSVVKGLLKTDGIRGLYKGFGTAVTGAIPARIIFLTALETTKVASFKMLEPFKLSETTQAAIANGIGGMTSSICAQAVFVPIDVISQKLMVQGYSGHAQYSGGLDVARKLIRSEGIRGLYRGFGLSVMTYSPSSAVWWASYGSSQRFLWRFLEDDVKSEKGTPSLPNIVLVQAAGGIIAGATASCITTPLDTIKTRLQVMGHGKKSSVKQVVKELISEDGWKGVYRGLGPRFVSMSAWGTSMILAYEYLKRLCAKDEEAAGQQSGIVSTD 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03487 323 FunFam Mitochondrial substrate carrier family protein 17 309 - -
Mepo5g03487 323 SUPERFAMILY Mitochondrial carrier 9 302 IPR023395 -
Mepo5g03487 323 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 311 - -
Mepo5g03487 323 Gene3D Mitochondrial carrier domain 17 318 IPR023395 -
Mepo5g03487 323 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085
Mepo5g03487 323 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Mepo5g03487 323 PRINTS Mitochondrial carrier protein signature 229 251 IPR002067 GO:0055085
Mepo5g03487 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 305 IPR018108 -
Mepo5g03487 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 97 IPR018108 -
Mepo5g03487 323 Pfam Mitochondrial carrier protein 19 97 IPR018108 -
Mepo5g03487 323 Pfam Mitochondrial carrier protein 224 309 IPR018108 -
Mepo5g03487 323 Pfam Mitochondrial carrier protein 115 202 IPR018108 -
Mepo5g03487 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03487 Mepo-Chr5 43104251 43109975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03487 6 310 Chloroplast and Mitochondria Gene Families AT5G15640 75.570 6.74e-169 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03487 K15121 - gmx:100819519 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g03487 5 43104251 43109975 Mepo3g00347 3 4674940 4682332 PCT