Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03486 ATGTTCTTTCTTTCAGAAGCTTATGATCCACTTGACCCGAATGGAAATATCACAATCAAATGGGATATCATAAGCTGGACACCTGATGGTTATGTTGCTGTTGTTACAATGAACAACTTCCAACGTTATCGTCATATATCGGCACCTGGATGGTCATTAGGATGGAATTGGGGAAAGGACGAGGTAATATGGAACATGTTGGGAGGACAGGCAACTGAACAAGGAGATTGTTCAAAATTTAAAGGAACCATCCCACATTGCTGTAAAAAACATCCAACGGTCATAGATTTACTTCCTGGGACGCCTTATAATCAACAAATTGCAAATTGTTGCAAAGGTGGTGTTGTCAGCTCATGGGCACAGGATCCCATAAATGCGGTTTCAGCATTTCAAGTCAGCGTTGGTAGAGCTGGTACAACTAACAAAACTGTCAAACTGCCGAAAAATTTCACCTTGAAAGCACCTGGACCAGGTTATACATGTGGGCCAGCAAAAGTTGTGAAGCCTACTAAATACATAACATCAGACAAAAGGAGAGTGACTCAAGCACTTATGACATGGAATGTGATATGCACGTATTCACAATTTCTAGCTCCGAAAACTCCAACTTGCTGCATCGCCCTCTCATCATTCTATAATGATATTATCGAACCCTGCCCGACATGTTCATGCGGCTGCCAGGGCAACTCAGCTCAATCAGGAAGCTGTATAGATCCAAGTGCGCCACATTTGGCCTCGGTTGCAAACAGCTATCCAACGACTAGTACCACGCCTTTGGTTCAATGTACTAGTCATATGTGTCCTATCCGAGTTCACTGGCACATTAATCTTAACTACAAGGAGTATTGGCGCGTAAAGGTCACTGTGACCAATTTCAACTACAGGACGAATTACTCAGATTGGAACTTGGTTGTTCAACATCCAAACTTTTACAATCTGACTCAACTTTCCAGTTTCAACTACAAATCAATAAATGATGCAACAATGATTTGGGGAGTTAAATTTTACAAAGATTTACTCATGCAAGCCGGTCCTACTGGTAATGTACAACCAGAGCTACTTTTCCGAAAGGATAAGAGTTTTACTTTTGATAAAGGTTGGGCTTTTCCCCGAAGAATCTATTTCAATGGCGACAACTGTGTGATGCCTCCACCAGACGCTTATCCATGGTTGCCTAATGAATGA 1185 0.4186 MFFLSEAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQRYRHISAPGWSLGWNWGKDEVIWNMLGGQATEQGDCSKFKGTIPHCCKKHPTVIDLLPGTPYNQQIANCCKGGVVSSWAQDPINAVSAFQVSVGRAGTTNKTVKLPKNFTLKAPGPGYTCGPAKVVKPTKYITSDKRRVTQALMTWNVICTYSQFLAPKTPTCCIALSSFYNDIIEPCPTCSCGCQGNSAQSGSCIDPSAPHLASVANSYPTTSTTPLVQCTSHMCPIRVHWHINLNYKEYWRVKVTVTNFNYRTNYSDWNLVVQHPNFYNLTQLSSFNYKSINDATMIWGVKFYKDLLMQAGPTGNVQPELLFRKDKSFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNE 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03486 394 Pfam COBRA-like protein 31 194 IPR006918 GO:0010215|GO:0016020
Mepo5g03486 394 PIRSF COBRA 1 394 IPR006918 GO:0010215|GO:0016020
Mepo5g03486 394 PANTHER PROTEIN COBRA 3 393 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03486 Mepo-Chr5 43098968 43103016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03486 5 393 COBRA Gene Family AT3G02210 75.063 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03486 - - gmx:100783820 721.85