Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03485 ATGTTGTTCGTCCATTTCCTTAAACATTGTCCATGCATGTTTCTCTTCCTGATATTTACACTGTTTTACACTTCAACAGAAGCTTATGATCCACTTGACCCAAATGGGAATATCACAATAAAATGGGATATCATAAGCTGGACAGCTGATGGTTATGTCGCCACCGTTACGATGAACAACTTCCAACAGTATCGTCATATATCGTCACCTGGATGGTCATTAGGATGGACATGGGCAAAGAAAGAGGTAATATGGAACATGGTAGGAAGTCAGACAACTGAACAAGGAGATTGTTCAAAATTTAAAGGAAACATCCCGCATTGCTGTAAAAAAGATCCAACTGTCGTAGATTTACTTCCCGGAACACCTTACAATCAACAAACTGCAAATTGTTGCAAAGGTGGAGTACTCAGCTCATGGGCACAGGATCCAACAAATGCAGTTGCGTCATTTCAGGTTATCGTTGGTAGAGCTGGCACAACCAATAAAACTGTCAAACTGCCGCAAAATTTCACCCTTAAAGCACCTGGACCAGGTTATACATGTGGACAAGCAAAAACTGGAACACCTACTAAATTTACAACACCAGACAAAAGGAGAGTGACTCAAGCACTTATGACATGGAATGTGACATGCACATATTCACAATTTTTAGCTCAACAAACTCCAACTTGTTGTGTTGCCCTCTCGTCATTCTATAATGATACTATTGTGCCCTGCCCAACATGTTCATGCGGCTGCCAAGGCAACTCACCTCAATCAGGAAACTGTATAGATCCAAGTGCGTCGCATTTGGCATCGGTTGTTAACGGCTTTCCGAAGAATAGTATTACGCCTTTGGTTCAATGTACTAGTCATATGTGTCCTATCCGAGTTCATTGGCACATTAAGCTTAACTACAAGGAGTATTGGCGCGTAAAGGTCACTGTTACTAATTTCAATTACAGGATGAATTACTCAGATTGGAACTTGGTTGTTCAACATCCGAACTTTGACAATCTGACTCAACTTTTCAGTTTCAACTCCAAACCAATAACTCCTTACGGGTCGATAAATGATACAGCAATGCTTTGGGGAGTTAAATTCTACAATGATTTACTTATGCAAGCTGGTCCTATTGGTAATGTACAATCAGAGCTACTTTTCCGAAAGGATTCAAATTTTACTTTCGATAAAGGTTGGGCTTTTCCCCGGAGAATCTATTTCAACGGCGACAACTGTGTGATGCCACCACCTGATGCGTATCCATGGTTACCTAATGCCGGTTCCAAACAAAAGGTTTCTTTCCTTGCTTTGGTGATGGCTTCGCTGGTAGCCTTGGTACTTCATGCACATTCTTAA 1341 0.4116 MLFVHFLKHCPCMFLFLIFTLFYTSTEAYDPLDPNGNITIKWDIISWTADGYVATVTMNNFQQYRHISSPGWSLGWTWAKKEVIWNMVGSQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQTANCCKGGVLSSWAQDPTNAVASFQVIVGRAGTTNKTVKLPQNFTLKAPGPGYTCGQAKTGTPTKFTTPDKRRVTQALMTWNVTCTYSQFLAQQTPTCCVALSSFYNDTIVPCPTCSCGCQGNSPQSGNCIDPSASHLASVVNGFPKNSITPLVQCTSHMCPIRVHWHIKLNYKEYWRVKVTVTNFNYRMNYSDWNLVVQHPNFDNLTQLFSFNSKPITPYGSINDTAMLWGVKFYNDLLMQAGPIGNVQSELLFRKDSNFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSKQKVSFLALVMASLVALVLHAHS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03485 446 PANTHER PROTEIN COBRA 15 436 IPR006918 GO:0010215|GO:0016020
Mepo5g03485 446 PIRSF COBRA 1 446 IPR006918 GO:0010215|GO:0016020
Mepo5g03485 446 Pfam COBRA-like protein 52 215 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03485 Mepo-Chr5 43091714 43096043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03485 14 445 COBRA Gene Family AT3G02210 74.194 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03485 - - gmx:100783820 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00349 3 4698687 4702572 Mepo5g03485 5 43091714 43096043 PCT