Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03484 ATGGATTCAAATAATTCAGAATTCAATAAAGAGGCGACTGTAACGATCCACAATTTCCAAATGTTTCGACACATAATGAATCCGGGATGGACCTTAGGATGGACATGGGCTAAGAGAGAAGTTATATGGTCAGTGACAGGAGCTCAAACCACAGAGCAAGGAGATTGTTCAAGGTTCAAAGGCAATATACCTCATTGCTGCAAGAAAATCCCTACAGTTGTAGACCTTCTCCCTGGTGTACCTTACAACCAACAGTTCTCAAACTGTTGTAAAGGCGGAGTCGTTGCAGCATGGGGACAAGATCCTTCAGAAGCTATATCAGCTTTTCAAGTTAGTGTTGGACAAGCAGGTACCTCAAACAGAACGGTTAAACTTCCGAAGAATTTCACTCTTTTGGCTCCTGGACCTGGATATACTTGTGGCCCTGCAAAGGTTGTTCCTTCCACCAATTTCCTTACACCTGATAGACGCCGCAAGACACAAGCATTGATGACATGGAATGTTACCTGCACATACTCACAATTTCTAGCAAGAAAGAATCCAAGTTGCTGTGTATCTTTATCATCCTTCTACAATGAAACTATTACACCTTGTCCCCATTGTGCATGTGGCTGCCAAAACAAGAAGAACTGTGTAAAGAGTGACTCTAAGATTCTGAGCATGGTAGGGGTTCATACTCCAAAGAAAGACAATGAACCATTGATGCAATGCACTCATCATATGTGCCCAATTAGGGTTCACTGGCATGTGAAGACTAACTATAAGGACTATTGGCGAGTGAAAATCGCGGTAACGAATTTCAATTACAGGATGAATTACTCTCTCTGGAGTCTTGCAATTCAACATCCAAATCTTAACAATGTCACACAAGTTTTCAGCTTCAATTACAAGCCACTTCTTCCATATGAATCCATAAATGACACTGGCATGTTCTATGGAATGAAATACTTCAATGATCTACTAATGGAAGCTGGACCAAAGGGAAATATTCAATCAGAAGTATTACTTCAGAAAAACAAAGATACCTTCACATTCAAGCAAGGATGGGCATTTCCTCATAAGGTTTACTTTAATGGTGATGAATGCATGCTTCCTCCACCTGATACCTACCCTTTTCTCCCTAATTCTGCCCCTGCAAGACTAGTTACCTTTAAGGCACTCATCTTCTCATTATTTTTACTGCTAGCAGTTTGGTGA 1197 0.4085 MDSNNSEFNKEATVTIHNFQMFRHIMNPGWTLGWTWAKREVIWSVTGAQTTEQGDCSRFKGNIPHCCKKIPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSEAISAFQVSVGQAGTSNRTVKLPKNFTLLAPGPGYTCGPAKVVPSTNFLTPDRRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPHCACGCQNKKNCVKSDSKILSMVGVHTPKKDNEPLMQCTHHMCPIRVHWHVKTNYKDYWRVKIAVTNFNYRMNYSLWSLAIQHPNLNNVTQVFSFNYKPLLPYESINDTGMFYGMKYFNDLLMEAGPKGNIQSEVLLQKNKDTFTFKQGWAFPHKVYFNGDECMLPPPDTYPFLPNSAPARLVTFKALIFSLFLLLAVW 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03484 398 PIRSF COBRA 3 398 IPR006918 GO:0010215|GO:0016020
Mepo5g03484 398 Pfam COBRA-like protein 12 173 IPR006918 GO:0010215|GO:0016020
Mepo5g03484 398 PANTHER PROTEIN COBRA 11 391 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03484 Mepo-Chr5 43087711 43091422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03484 12 397 COBRA Gene Family AT3G29810 64.781 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03484 - - gmx:100798678 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g03484 5 43087711 43091422 Mepo3g00349 3 4698687 4702572 PCT
Mepo3g00350 3 4702758 4706778 Mepo5g03484 5 43087711 43091422 PCT