Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo5g03476 | ATGGGTTCTGTTTGTTGTTGTTTGAGCTTTGATGATTATGAAGATTATGTAAATCCAAATAGTCCTGTGTATAGGAATTGCCCGTGTCTAAATTGCTTGGTTCAGAATCTATTGAATGTGTATGCCTCAATATTTCGTAGAGGGGAAGCACATTCAGTTCCTTCATCTCTTCAGGGGACAGCGTCCATGACTTCTGCGGCATCACTTGATAATTCTCTATCTGACATGTACCGTTCTCCTCCAAGGCCTTTACCTTATGATGCAGAGCCTCGGTTTTTCCGCTCGCAGCGTGATGGATTAGTTTCAAGGCGTGAGAAAAGTTCAAGTCATTCAAATGATGAAACTGAACCTCTAAGAAGTGACACAGATGTGGATCCAGAACCTTTACATTCATCAGAGAAATGGAATGAATGTGCCTGTGAAGATGAATCAAAGATATACCGTTCTAAGTCCGCATTAAGACTTTCATCGGCAAAATATACAACTGGAGTTGGACTCATTTATGCGTCATCGGAAGACGAGGATATTTGTCCAACTTGTCTTGAAGAGTACACTAAAGAGAATCCGAAGATAATGACAAAATGCTCTCATCATTTTCACCTTGGTTGCATCTACGAGTGGATGGAGAGAAGTGACAACTGTCCAGTTTGTGGGAAGGAAATGGATTTCGATGAAACAACTTACACTTGA | 690 | 0.4087 | MGSVCCCLSFDDYEDYVNPNSPVYRNCPCLNCLVQNLLNVYASIFRRGEAHSVPSSLQGTASMTSAASLDNSLSDMYRSPPRPLPYDAEPRFFRSQRDGLVSRREKSSSHSNDETEPLRSDTDVDPEPLHSSEKWNECACEDESKIYRSKSALRLSSAKYTTGVGLIYASSEDEDICPTCLEEYTKENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKEMDFDETTYT | 229 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo5g03476 | 229 | CDD | RING-H2_AIRP1-like | 173 | 221 | - | - | |
Mepo5g03476 | 229 | SUPERFAMILY | RING/U-box | 172 | 224 | - | - | |
Mepo5g03476 | 229 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 57 | 225 | - | - | |
Mepo5g03476 | 229 | MobiDBLite | consensus disorder prediction | 98 | 131 | - | - | |
Mepo5g03476 | 229 | Pfam | RING-H2 zinc finger domain | 174 | 217 | IPR024766 | GO:0008270 | |
Mepo5g03476 | 229 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 154 | 226 | IPR013083 | - | |
Mepo5g03476 | 229 | SMART | ring_2 | 177 | 217 | IPR001841 | - | |
Mepo5g03476 | 229 | ProSiteProfiles | Zinc finger RING-type profile. | 177 | 217 | IPR001841 | - | |
Mepo5g03476 | 229 | FunFam | E3 ubiquitin-protein ligase At3g02290-like | 154 | 224 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo5g03476 | Mepo-Chr5 | 42971603 | 42978002 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo5g03476 | 1 | 226 | C3H Transcription Factor Family | AT5G15790 | 58.009 | 1.02e-91 | 267 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo5g03476 | - | - | gmx:100777068 | 417.157 |