Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03471 ATGGTTCGTCAAACTAATCTTGTTATCATTGGTGTCACCCTTGGTCTGACCCTTGGAATTCTCATTTCTTGTCTCCTATTTTTCGGCATAAGGTGGTGCAGAAAACGTTCTCATCTTTCACGATCTGCGAGTGAGCCTAGTTTGACAACCCTCCCGATACGAACAAATGGACCTGGAACAAGTATCGACTTTAGTGCATCCATCACTAGTTCCATAGGCACATCAAGGTCAGATAATCTACAGAAAAATTCCCGCTTCACTTGGTGGAATAATCAAAATAAAGACCGGTTTGCTTCAGCATCAGGCATTTTGAAGTATTCGTACAAAGAACTTCAAAAGGCCACACAAAATTTCACGACTACCTTGGGACAAGGATCATTTGGCACGGTTTATAAAGCCACAATATCTACCGGAGAGGTGGTAGCTGTGAAGGTGCTAGCAAACAATTCCAAACAAGGGGAGAGAGAATTCCAAACAGAGGTGTCTCTGCTAGGAAGACTGCATCACCGGAATCTTGTAAATTTGCTTGGATATTGTGTAGATAAAGGACAACGCATACTGGTTTATCAGTTCATGAGCAATGGAAGTTTAGCAAGTATTTTATATGATGAAGAAAAGAAGTTAAGTTGGGATGACAGGCTGCAAATTGCTGTTGATATTTCACATGGAATAGAGTATCTTCATGAAGGAGCAGTCCCTCCCGTCATACATCGTGATTTGAAGTCTCCCAACATATTGCTAGATGGCTCTATGAGAGCTAAGGTTGCTGATTTTGGCCTCTCAAAGGAAGAGAGATTTGATGGCCGAAATTCTGGTCTTAAAGGTACATATGGTTACATGGACCCGGCATACATTTCCTCAAGCAAGTTAACAACCAAGAGTGACATATACAGTTTTGGTGTCATACTTTTTGAGCTCATCACTGCCATCCACCCTCATCAAAATTTGATGGAATATGTTAATCTTGCTGCTATGGAACATGATGGTATAGATGAGATACTTGACAAGCAACTTGTTGGAAAATGCAATGTTTTAGAAGTAAGGCAACTTGCTAAAATTGCACACAAATGCTTACACAAATCACCTAAGAGAAGGCCTTCAATAGGTGAAGTTTCACAAGGTATATCAAAGATAAAGCAAAGAAGATTGCGCAGTGTGATGGAAGATAACTTGTCATTTGCTAATAGTAATAACTTTTCAAGAGCCGCGAGCCGATTAGAAGATCGACAAGTTGAATTAAGTAGGATAGTTACCATGACCATCAAAGAAACTGTATGA 1278 0.4014 MVRQTNLVIIGVTLGLTLGILISCLLFFGIRWCRKRSHLSRSASEPSLTTLPIRTNGPGTSIDFSASITSSIGTSRSDNLQKNSRFTWWNNQNKDRFASASGILKYSYKELQKATQNFTTTLGQGSFGTVYKATISTGEVVAVKVLANNSKQGEREFQTEVSLLGRLHHRNLVNLLGYCVDKGQRILVYQFMSNGSLASILYDEEKKLSWDDRLQIAVDISHGIEYLHEGAVPPVIHRDLKSPNILLDGSMRAKVADFGLSKEERFDGRNSGLKGTYGYMDPAYISSSKLTTKSDIYSFGVILFELITAIHPHQNLMEYVNLAAMEHDGIDEILDKQLVGKCNVLEVRQLAKIAHKCLHKSPKRRPSIGEVSQGISKIKQRRLRSVMEDNLSFANSNNFSRAASRLEDRQVELSRIVTMTIKETV 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03471 425 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Mepo5g03471 425 Gene3D Transferase(Phosphotransferase) domain 1 192 400 - -
Mepo5g03471 425 FunFam Os07g0541700 protein 192 274 - -
Mepo5g03471 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Mepo5g03471 425 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 386 - -
Mepo5g03471 425 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 90 191 - -
Mepo5g03471 425 SMART serkin_6 116 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03471 425 SUPERFAMILY Protein kinase-like (PK-like) 89 372 IPR011009 -
Mepo5g03471 425 Gene3D Phosphorylase Kinase; domain 1 79 191 - -
Mepo5g03471 425 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Mepo5g03471 425 CDD STKc_IRAK 122 378 - -
Mepo5g03471 425 ProSiteProfiles Protein kinase domain profile. 116 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03471 425 Pfam Protein tyrosine and serine/threonine kinase 118 372 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03471 Mepo-Chr5 42894653 42901120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03471 102 371 Receptor kinase-like Gene Family AT3G19300 44.643 1.33e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Mepo5g03471 PK_Tyr_Ser-Thr 6.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03471 - - gmx:100819995 693.345