LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g03461	ATGACTAGTGGAATTCATGTACCTGATACGGAGAAGAAAAAATCAAGAAAGAACAAGACAGTTATTGATGAAAATGCATCTTTGTTACCTAAGACACAAGAAAGTGATGTTAAGTTTGATGAATTTAATGGAGCTTCATTTTCTGGTGCTGTTTTCAACTTATCAACCACAATTATTGGTGCTGGAATTATGGGATTGCCTGCATGTGTGAAAAAGTTGGGGATGGTGCCTGGTCTTATTATCATAGTCCTAACAGCTTTATTGACAGAGAAGTCAATTGATTTCATAATCAGGTTTTCTAGGGCAGGGAAACTTTCTTCCTATGGAAATCTTATGGGAGATACCTTTGGGAAATACGGAAAAGCATCGTTGGAGATAAGTGTTTTAAGTACCATTGGTACTTTGATCGTTTACATGATCATTATTGGTGATGTGATTTCTGGAACAACTTCAAGTGGAATTCACCATGCTGGTGTCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTAGCCGTTTATTTGTTCTTACTTTCGCAACATTTGCTGTGTTTGCACCTTTGGTCAGCTTTAAGCGGATTGATTCATTGAGATTCACGTCTGCATTGTCAATTGGATTAGCAGTTGTTTTCCTTATCATTGCTGTGGGGATCTCAATTATCAAGATTATAAGTGGCGGCATTGGGATGCCTAGACTCTTCCCAATCATTACTGATTTAGCTTCGGTTTTCGATCTATTCACTGTAGTTCCTGTGGTGATGACAGCCTACGTATGTCACTACAATGTTCAAAGCATAGAGAATGAACTGGAGGATTCCTCACGGATACGTGGGGTTGTGCGTACTTCCCTTACTCTATGTTCTTCAGTGTACTTACTGACAAGCTTCTTTGGGTTCCTTCTATTTGGTGAAGGAACTCTTGATGATGTGCTTGCCAATTTTGACACTGATCTTGGAATTCCCTTTGGTTCTGTGCTCAATGATGCTGTTCGTTTGAGCTATGCTGCGCATCTTGTGCTTGTATTTCCTGTAATTTTCTACGCATTGAGACTCAACGTAGATGGTCTGATATTTTCCTCATCAACAAGGCCTTTGGTTGTTGATAACTTCAGATTTGCATCAGTCACTATTGCCCTTGTTGTCATTATCTTCCTCGGAGCAAATTTCATACCAAATATTTGGGTTATTTTCCAGTTCACTGGAGCAACAGGTGCTGTTTGTATAGCATTCATATTTCCAGCTGCAATCGCTCTGAGGGATCGATACAACATAGCAACTAAAACAGATACGATTCTGGCCGTCCTTATGATAGTGCTGGCAGTTTTGTCAAATGCTGTGGCGATATACAGTGATGCTTATGCTTTGATCAACGAGAAGAAAGCATAA	1383	0.3991	MTSGIHVPDTEKKKSRKNKTVIDENASLLPKTQESDVKFDEFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLIIIVLTALLTEKSIDFIIRFSRAGKLSSYGNLMGDTFGKYGKASLEISVLSTIGTLIVYMIIIGDVISGTTSSGIHHAGVLEGWFGVHWWTSRLFVLTFATFAVFAPLVSFKRIDSLRFTSALSIGLAVVFLIIAVGISIIKIISGGIGMPRLFPIITDLASVFDLFTVVPVVMTAYVCHYNVQSIENELEDSSRIRGVVRTSLTLCSSVYLLTSFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRLSYAAHLVLVFPVIFYALRLNVDGLIFSSSTRPLVVDNFRFASVTIALVVIIFLGANFIPNIWVIFQFTGATGAVCIAFIFPAAIALRDRYNIATKTDTILAVLMIVLAVLSNAVAIYSDAYALINEKKA	460

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g03461	460	Pfam	Transmembrane amino acid transporter protein	45	449	IPR013057	-
	Mepo5g03461	460	PANTHER	AMINO ACID TRANSPORTER	40	442	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo5g03461	Mepo-Chr5	42709051	42712063	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo5g03461	16	458	Amino Acid or Auxin Permease AAAP Family	AT3G30390	65.022	0.0	587

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g03461	K14207		-	gmx:100791286	685.641